logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000002529_03226

You are here: Home > Sequence: MGYG000002529_03226

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Aeromonas veronii
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Aeromonadaceae; Aeromonas; Aeromonas veronii
CAZyme ID MGYG000002529_03226
CAZy Family CBM73
CAZyme Description GlcNAc-binding protein A
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1168 MGYG000002529_24|CGC1 130248.15 5.5355
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002529 4703176 Isolate China Asia
Gene Location Start: 10327;  End: 13833  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.14

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM73 1115 1166 2.6e-21 0.9629629629629629

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK13211 PRK13211 7.23e-30 1007 1168 312 477
N-acetylglucosamine-binding protein GbpA.
smart00495 ChtBD3 8.67e-07 1113 1151 1 38
Chitin-binding domain type 3.
cd12214 ChiA1_BD 1.28e-05 1115 1146 1 34
chitin-binding domain of Chi A1-like proteins. This group contains proteins related to the chitin binding domain of chitinase A1 (ChiA1) of Bacillus circulans WL-12. Glycosidase ChiA1 hydrolyzes chitin and is comprised of several domains: the C-terminal chitin binding domain, an N-terminal and catalytic domain, and 2 fibronectin type III-like domains. Chitinases function in invertebrates in the degradation of old exoskeletons, in fungi to utilize chitin in cell walls, and in bacteria which use chitin as an energy source. Bacillus circulans WL-12 ChiA1 facilitates invasion of fungal cell walls. The ChiAi chitin binding domain is required for the specific recognition of insoluble chitin. although topologically and structurally related, ChiA1 lacks the characteristic aromatic residues of Erwinia chrysanthemi endoglucanase Z (CBD(EGZ)).
sd00042 LVIVD 0.003 195 316 7 112
LVIVD repeat. LVIVD repeats are mainly found in bacterial and archaeal cell surface proteins, many of them hypothetical. Structurally, LVIVD repeats have been predicted to form a beta-propeller, with each repeat forming one four-stranded anti-parallel beta-sheet blade.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QHC06284.1 0.0 1 1168 1 1168
QGW97493.1 0.0 1 1168 1 1168
BBT97288.1 0.0 1 1168 1 1168
ANB53381.1 0.0 1 1168 1 1168
QET80447.1 0.0 1 1168 1 1168

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A5F398 1.25e-16 836 985 849 995
ToxR-activated gene A lipoprotein OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395) OX=345073 GN=tagA PE=3 SV=2
P0C6Q7 4.88e-16 836 985 849 995
ToxR-activated gene A lipoprotein OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) OX=243277 GN=tagA PE=3 SV=1
Q7MEW9 2.49e-11 965 1168 280 485
GlcNAc-binding protein A OS=Vibrio vulnificus (strain YJ016) OX=196600 GN=gbpA PE=3 SV=1
Q8EHY2 7.36e-11 978 1168 285 475
GlcNAc-binding protein A OS=Shewanella oneidensis (strain MR-1) OX=211586 GN=gbpA PE=3 SV=2
Q9KLD5 2.31e-10 969 1167 284 484
GlcNAc-binding protein A OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) OX=243277 GN=gbpA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000316 0.998943 0.000227 0.000179 0.000161 0.000144

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002529_03226.