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CAZyme Information: MGYG000002522_01364

You are here: Home > Sequence: MGYG000002522_01364

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Lachnoanaerobaculum umeaense
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Lachnoanaerobaculum; Lachnoanaerobaculum umeaense
CAZyme ID MGYG000002522_01364
CAZy Family GH73
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
643 70165.9 5.0501
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002522 2810441 Isolate Sweden Europe
Gene Location Start: 1503468;  End: 1505399  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002522_01364.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4193 LytD 2.66e-14 390 541 101 245
Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism].
pfam08239 SH3_3 8.17e-10 45 104 1 54
Bacterial SH3 domain.
pfam12733 Cadherin-like 6.52e-07 561 641 1 88
Cadherin-like beta sandwich domain. This domain is found in several bacterial, metazoan and chlorophyte algal proteins. A profile-profile comparison recovered the cadherin domain and a comparison of the predicted structure of this domain with the crystal structure of the cadherin showed a congruent seven stranded secondary structure. The domain is widespread in bacteria and seen in the firmicutes, actinobacteria, certain proteobacteria, bacteroides and chlamydiae with an expansion in Clostridium. In contrast, it is limited in its distribution in eukaryotes suggesting that it was derived through lateral transfer from bacteria. In prokaryotes, this domain is widely fused to other domains such as FNIII (Fibronectin Type III), TIG, SLH (S-layer homology), discoidin, cell-wall-binding repeat domain and alpha-amylase-like glycohydrolases. These associations are suggestive of a carbohydrate-binding function for this cadherin-like domain. In animal proteins it is associated with an ATP-grasp domain.
smart00287 SH3b 4.32e-06 40 105 4 63
Bacterial SH3 domain homologues.
PRK13914 PRK13914 7.78e-06 24 116 66 152
invasion associated endopeptidase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AYA99665.1 0.0 1 643 1 643
QRV21758.1 2.30e-153 34 641 35 607
ADL03932.1 2.30e-153 34 641 35 607
ANU49989.1 4.01e-149 41 639 43 675
QQR01104.1 4.01e-149 41 639 43 675

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6FXO_A 2.11e-10 395 541 98 244
ChainA, Bifunctional autolysin [Staphylococcus aureus subsp. aureus Mu50]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q6GAG0 6.08e-09 395 541 1104 1250
Bifunctional autolysin OS=Staphylococcus aureus (strain MSSA476) OX=282459 GN=atl PE=3 SV=1
Q8NX96 6.09e-09 395 541 1110 1256
Bifunctional autolysin OS=Staphylococcus aureus (strain MW2) OX=196620 GN=atl PE=3 SV=1
Q931U5 7.99e-09 395 541 1102 1248
Bifunctional autolysin OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) OX=158878 GN=atl PE=1 SV=2
Q99V41 7.99e-09 395 541 1102 1248
Bifunctional autolysin OS=Staphylococcus aureus (strain N315) OX=158879 GN=atl PE=1 SV=1
A7X0T9 8.00e-09 395 541 1109 1255
Bifunctional autolysin OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) OX=418127 GN=atl PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.087546 0.138539 0.772021 0.000609 0.000501 0.000762

TMHMM  Annotations      download full data without filtering help

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