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CAZyme Information: MGYG000002496_01096
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Salmonella bongori | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella bongori | |||||||||||
| CAZyme ID | MGYG000002496_01096 | |||||||||||
| CAZy Family | CBM13 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 239782; End: 240303 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CBM13 | 57 | 164 | 7.8e-18 | 0.6117021276595744 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| NF035930 | lectin_2 | 9.95e-17 | 53 | 162 | 118 | 230 | lectin. Lectins are important adhesin proteins, which bind carbohydrate structures on host cell surface. The carbohydrate specificity of diverse lectins to a large extent dictates bacteria tissue tropism by mediating specific attachment to unique host sites expressing the corresponding carbohydrate receptor. |
| pfam00652 | Ricin_B_lectin | 1.42e-15 | 49 | 167 | 3 | 122 | Ricin-type beta-trefoil lectin domain. |
| cd00161 | RICIN | 9.72e-13 | 8 | 129 | 1 | 123 | Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ligand binding occurs on exposed surfaces of the compact domain sturcture. |
| smart00458 | RICIN | 1.39e-11 | 56 | 165 | 1 | 110 | Ricin-type beta-trefoil. Carbohydrate-binding domain formed from presumed gene triplication. |
| NF035929 | lectin_1 | 5.99e-11 | 60 | 173 | 719 | 837 | lectin. Lectins are important adhesin proteins, which bind carbohydrate structures on host cell surface. The carbohydrate specificity of diverse lectins to a large extent dictates bacteria tissue tropism by mediating specific attachment to unique host sites expressing the corresponding carbohydrate receptor. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QQP73626.1 | 9.16e-127 | 1 | 173 | 1 | 173 |
| AGR58371.1 | 9.16e-127 | 1 | 173 | 1 | 173 |
| CCC30180.1 | 9.16e-127 | 1 | 173 | 1 | 173 |
| QVP35875.1 | 9.16e-127 | 1 | 173 | 1 | 173 |
| ASG55043.1 | 9.16e-127 | 1 | 173 | 1 | 173 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q56030 | 3.12e-110 | 1 | 172 | 1 | 172 | Probable lipoprotein EnvE OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=envE PE=3 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as LIPO
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000000 | 0.000001 | 1.000050 | 0.000000 | 0.000000 | 0.000000 |