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CAZyme Information: MGYG000002476_03674
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Yersinia pestis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Yersinia; Yersinia pestis | |||||||||||
| CAZyme ID | MGYG000002476_03674 | |||||||||||
| CAZy Family | CE8 | |||||||||||
| CAZyme Description | Pectinesterase A | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 3961106; End: 3962191 Strand: - | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG4677 | PemB | 4.80e-151 | 1 | 358 | 46 | 405 | Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism]. |
| pfam01095 | Pectinesterase | 4.82e-47 | 29 | 350 | 1 | 290 | Pectinesterase. |
| PLN02990 | PLN02990 | 3.43e-35 | 18 | 350 | 252 | 549 | Probable pectinesterase/pectinesterase inhibitor |
| PRK10531 | PRK10531 | 4.16e-35 | 23 | 333 | 77 | 422 | putative acyl-CoA thioester hydrolase. |
| PLN02682 | PLN02682 | 2.29e-34 | 36 | 350 | 78 | 356 | pectinesterase family protein |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AJK17610.1 | 6.44e-264 | 1 | 361 | 1 | 361 |
| ABS49627.1 | 6.44e-264 | 1 | 361 | 1 | 361 |
| QPA82292.1 | 5.29e-263 | 1 | 361 | 1 | 361 |
| AJJ41692.1 | 5.29e-263 | 1 | 361 | 1 | 361 |
| AKS88769.1 | 5.29e-263 | 1 | 361 | 1 | 361 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3UW0_A | 4.02e-228 | 1 | 360 | 4 | 363 | Pectinmethylesterase from Yersinia enterocolitica [Yersinia enterocolitica subsp. enterocolitica 8081] |
| 2NSP_A | 9.75e-132 | 25 | 359 | 1 | 338 | ChainA, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937] |
| 1QJV_A | 3.72e-124 | 25 | 359 | 1 | 338 | ChainA, PECTIN METHYLESTERASE [Dickeya chrysanthemi],1QJV_B Chain B, PECTIN METHYLESTERASE [Dickeya chrysanthemi] |
| 2NTB_A | 3.72e-124 | 25 | 359 | 1 | 338 | Crystalstructure of pectin methylesterase in complex with hexasaccharide V [Dickeya dadantii 3937],2NTB_B Crystal structure of pectin methylesterase in complex with hexasaccharide V [Dickeya dadantii 3937],2NTP_A Crystal structure of pectin methylesterase in complex with hexasaccharide VI [Dickeya dadantii 3937],2NTP_B Crystal structure of pectin methylesterase in complex with hexasaccharide VI [Dickeya dadantii 3937],2NTQ_A Crystal structure of pectin methylesterase in complex with hexasaccharide VII [Dickeya dadantii 3937],2NTQ_B Crystal structure of pectin methylesterase in complex with hexasaccharide VII [Dickeya dadantii 3937] |
| 5C1E_A | 2.78e-19 | 41 | 358 | 19 | 294 | CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P0C1A8 | 3.46e-125 | 3 | 359 | 2 | 362 | Pectinesterase A OS=Dickeya chrysanthemi OX=556 GN=pemA PE=1 SV=1 |
| P0C1A9 | 4.90e-125 | 3 | 359 | 2 | 362 | Pectinesterase A OS=Dickeya dadantii (strain 3937) OX=198628 GN=pemA PE=1 SV=1 |
| Q9FJ21 | 2.09e-28 | 29 | 350 | 259 | 548 | Probable pectinesterase/pectinesterase inhibitor 58 OS=Arabidopsis thaliana OX=3702 GN=PME58 PE=2 SV=1 |
| O22149 | 1.78e-25 | 29 | 351 | 206 | 491 | Probable pectinesterase/pectinesterase inhibitor 17 OS=Arabidopsis thaliana OX=3702 GN=PME17 PE=2 SV=2 |
| Q43043 | 1.28e-22 | 22 | 336 | 51 | 328 | Pectinesterase OS=Petunia integrifolia OX=4103 GN=PPE1 PE=2 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000235 | 0.999112 | 0.000170 | 0.000155 | 0.000149 | 0.000141 |