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CAZyme Information: MGYG000002467_00662
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Yersinia frederiksenii_C | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Yersinia; Yersinia frederiksenii_C | |||||||||||
| CAZyme ID | MGYG000002467_00662 | |||||||||||
| CAZy Family | GH104 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 719577; End: 721238 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH104 | 349 | 487 | 1.9e-41 | 0.9310344827586207 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| cd00736 | lambda_lys-like | 7.28e-56 | 350 | 489 | 1 | 135 | Bacteriophage lambda lysozyme and similar proteins. Lysozyme from bacteriophage lambda hydrolyzes the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetylglucosamine (GlcNAc), as do other lysozymes. However, unlike other lysozymes, bacteriophage lambda does not produce a reducing end upon cleavage of the peptidoglycan, but rather uses the 6-OH of the same MurNAc residue to produce a 1,6-anhydromuramic acid terminal residue and is therefore a lytic transglycosylase. An identical 1,6-anhydro bond is formed in bacterial peptidoglycans by the action of the lytic transglycosylases of E. coli, though they differ structurally. |
| COG4678 | COG4678 | 1.81e-29 | 321 | 489 | 10 | 170 | Muramidase (phage lambda lysozyme) [Cell wall/membrane/envelope biogenesis, Mobilome: prophages, transposons]. |
| pfam00959 | Phage_lysozyme | 3.51e-04 | 373 | 454 | 1 | 84 | Phage lysozyme. This family includes lambda phage lysozyme and E. coli endolysin. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ATM95504.1 | 0.0 | 1 | 553 | 1 | 553 |
| AHM74501.1 | 0.0 | 1 | 553 | 1 | 554 |
| QAX78384.1 | 0.0 | 1 | 553 | 1 | 554 |
| AKF37938.1 | 0.0 | 1 | 553 | 1 | 554 |
| ALG45475.1 | 0.0 | 1 | 553 | 1 | 554 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1D9U_A | 1.46e-20 | 346 | 478 | 1 | 134 | ChainA, Bacteriophage Lambda Lysozyme [Lambdavirus lambda],1D9U_B Chain B, Bacteriophage Lambda Lysozyme [Lambdavirus lambda],3D3D_A Chain A, Lysozyme [Lambdavirus lambda],3D3D_B Chain B, Lysozyme [Lambdavirus lambda] |
| 1AM7_A | 7.95e-18 | 346 | 478 | 1 | 134 | ChainA, LYSOZYME [Lambdavirus lambda],1AM7_B Chain B, LYSOZYME [Lambdavirus lambda],1AM7_C Chain C, LYSOZYME [Lambdavirus lambda] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P03706 | 8.85e-20 | 346 | 478 | 1 | 134 | Endolysin OS=Escherichia phage lambda OX=10710 GN=R PE=1 SV=1 |
| P51771 | 2.42e-16 | 351 | 486 | 9 | 153 | Endolysin OS=Escherichia phage P2 OX=10679 GN=K PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000044 | 0.000003 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |