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CAZyme Information: MGYG000002465_04404
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Yersinia massiliensis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Yersinia; Yersinia massiliensis | |||||||||||
| CAZyme ID | MGYG000002465_04404 | |||||||||||
| CAZy Family | PL10 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 201; End: 1349 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL10 | 63 | 364 | 5.5e-93 | 0.9895833333333334 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam09492 | Pec_lyase | 2.86e-71 | 63 | 362 | 1 | 284 | Pectic acid lyase. Members of this family are isozymes of pectate lyase (EC:4.2.2.2), also called polygalacturonic transeliminase and alpha-1,4-D-endopolygalacturonic acid lyase. |
| TIGR02474 | pec_lyase | 1.31e-70 | 63 | 362 | 1 | 285 | pectate lyase, PelA/Pel-15E family. Members of this family are isozymes of pectate lyase (EC 4.2.2.2), also called polygalacturonic transeliminase and alpha-1,4-D-endopolygalacturonic acid lyase. [Energy metabolism, Biosynthesis and degradation of polysaccharides] |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AVX36261.1 | 2.62e-285 | 1 | 382 | 1 | 382 |
| QKJ11070.1 | 2.62e-285 | 1 | 382 | 1 | 382 |
| ATM87917.1 | 2.62e-285 | 1 | 382 | 1 | 382 |
| AHG20379.2 | 1.11e-245 | 1 | 381 | 2 | 382 |
| QND79777.1 | 5.94e-126 | 23 | 374 | 26 | 370 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1R76_A | 6.12e-36 | 53 | 377 | 84 | 407 | ChainA, pectate lyase [Niveispirillum irakense] |
Swiss-Prot Hits help
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000218 | 0.999142 | 0.000178 | 0.000169 | 0.000145 | 0.000137 |