logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000002453_00950

You are here: Home > Sequence: MGYG000002453_00950

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Akkermansia muciniphila_B
Lineage Bacteria; Verrucomicrobiota; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; Akkermansia muciniphila_B
CAZyme ID MGYG000002453_00950
CAZy Family GH2
CAZyme Description Beta-galactosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
912 MGYG000002453_12|CGC1 100479.59 8.3396
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002453 3096868 Isolate China Asia
Gene Location Start: 57973;  End: 60711  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002453_00950.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH2 47 624 2e-96 0.6103723404255319

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3250 LacZ 1.13e-57 104 472 60 411
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
PRK10150 PRK10150 1.73e-45 46 480 4 427
beta-D-glucuronidase; Provisional
PRK10340 ebgA 2.85e-43 69 485 59 475
cryptic beta-D-galactosidase subunit alpha; Reviewed
PRK09525 lacZ 1.09e-30 96 461 116 457
beta-galactosidase.
pfam02836 Glyco_hydro_2_C 6.21e-23 346 536 1 211
Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QWP27371.1 0.0 1 912 1 912
QWP22252.1 0.0 1 912 1 912
QWP68789.1 0.0 1 912 1 912
QWP03579.1 0.0 1 912 1 912
QWP63987.1 0.0 1 912 1 912

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5EUV_A 7.63e-58 57 842 1 728
ChainA, Beta-D-galactosidase [Paracoccus sp. 32d],5EUV_B Chain B, Beta-D-galactosidase [Paracoccus sp. 32d],5LDR_B Chain B, Beta-D-galactosidase [Paracoccus sp. 32d]
5LDR_A 7.74e-58 57 842 2 729
ChainA, Beta-D-galactosidase [Paracoccus sp. 32d]
4YPJ_A 6.33e-51 58 830 13 795
ChainA, Beta galactosidase [Niallia circulans],4YPJ_B Chain B, Beta galactosidase [Niallia circulans]
7CWD_A 3.24e-47 73 831 23 790
ChainA, beta-glalactosidase [Niallia circulans],7CWI_A Chain A, beta-galactosidase [Niallia circulans]
3GM8_A 5.36e-46 60 794 12 742
ChainA, Glycoside hydrolase family 2, candidate beta-glycosidase [Phocaeicola vulgatus ATCC 8482]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P77989 9.81e-80 52 840 3 735
Beta-galactosidase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) OX=340099 GN=lacZ PE=3 SV=2
P26257 5.30e-51 52 793 2 704
Beta-galactosidase OS=Thermoanaerobacterium thermosulfurigenes OX=33950 GN=lacZ PE=1 SV=1
T2KPJ7 4.52e-46 57 785 56 765
Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_21970 PE=2 SV=1
T2KM09 5.27e-42 74 795 61 764
Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22050 PE=2 SV=2
A7LXS9 9.04e-41 41 789 31 787
Beta-galactosidase BoGH2A OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153) OX=411476 GN=BACOVA_02645 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000368 0.998739 0.000267 0.000221 0.000199 0.000177

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002453_00950.