CAZyme Information: MGYG000002453_00807

Basic Information

• Species: Akkermansia muciniphila_B
• Lineage: Bacteria; Verrucomicrobiota; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; Akkermansia muciniphila_B
• CAZyme ID: MGYG000002453_00807
• CAZy Family: GH109
• CAZyme Description: Glycosyl hydrolase family 109 protein 1

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
473		51431.84	7.3665

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002453	3096868	Isolate	China	Asia

• Gene Location: Start: 457162; End: 458583 Strand: -

Full Sequence      

MSIFSSRRQFLKSLGLAAGAAAAGNVLPGQALEIPAGDSLWKSGAQASPRPSGSMYMGGF
KAPGLARIRLAFIGVGGRGFSHLAQMCVMDGVEIVGVCDLKEDLAKRGVDRVLSKMGKSP
LSYSGGDTEYLTMLKELKPDAVIISTDWSTHAGIACDSMKHGAHAFVEVPLAVSLEELWN
LVDTSEATRKHCMMMENVNYGRDELMFLNMVRQGVIGDLLHGEAAYIHCLVTQLGDTRGE
GAWRPEYHTRINGNLYPTHGLGPVAQYMNLARGEDHFSRVAAFASPALGRNAYAKKHLPA
DHRWNNTPFICGDMNTAIVKTQLGRTIVVQLDETSPRPYSRANLIQGTEGTLAGFPTRVA
GEKLGNGNYHEWIEGREKLAAIYEKYDHPLWKRIGNLATKMGGHGGMDFVMLSRIVECLR
NGEPMDQNVYEGAAWSSLLPLTAHSIAQGGMPVEFPDFTRGDWKTTAPLAVVS

Enzyme Prediction     

EC	3.2.1.49

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH109	66	465	4.7e-157	0.9874686716791979

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG0673	MviM	7.60e-19	67	290	3	213	Predicted dehydrogenase [General function prediction only].
pfam01408	GFO_IDH_MocA	6.01e-11	68	197	1	119	Oxidoreductase family, NAD-binding Rossmann fold. This family of enzymes utilize NADP or NAD. This family is called the GFO/IDH/MOCA family in swiss-prot.
COG4091	COG4091	0.008	68	112	18	62	Predicted homoserine dehydrogenase, contains C-terminal SAF domain [Amino acid transport and metabolism].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QWP49875.1	0.0	1	473	1	473
QWP22688.1	0.0	1	473	1	473
QWP64426.1	0.0	1	473	1	473
QWP04019.1	0.0	1	473	1	473
QWP54711.1	0.0	1	473	1	473

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6T2B_A	0.0	26	473	1	448	Glycosidehydrolase family 109 from Akkermansia muciniphila in complex with GalNAc and NAD+. [Akkermansia muciniphila],6T2B_B Glycoside hydrolase family 109 from Akkermansia muciniphila in complex with GalNAc and NAD+. [Akkermansia muciniphila],6T2B_C Glycoside hydrolase family 109 from Akkermansia muciniphila in complex with GalNAc and NAD+. [Akkermansia muciniphila],6T2B_D Glycoside hydrolase family 109 from Akkermansia muciniphila in complex with GalNAc and NAD+. [Akkermansia muciniphila]
2IXA_A	8.67e-75	67	464	20	432	A-zyme,N-acetylgalactosaminidase [Elizabethkingia meningoseptica],2IXB_A Crystal structure of N-ACETYLGALACTOSAMINIDASE in complex with GalNAC [Elizabethkingia meningoseptica]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
B2UQL7	0.0	1	473	1	473	Glycosyl hydrolase family 109 protein 2 OS=Akkermansia muciniphila (strain ATCC BAA-835 / DSM 22959 / JCM 33894 / BCRC 81048 / CCUG 64013 / CIP 107961 / Muc) OX=349741 GN=Amuc_0920 PE=1 SV=1
B2UL75	4.73e-233	5	472	5	480	Glycosyl hydrolase family 109 protein 1 OS=Akkermansia muciniphila (strain ATCC BAA-835 / DSM 22959 / JCM 33894 / BCRC 81048 / CCUG 64013 / CIP 107961 / Muc) OX=349741 GN=Amuc_0017 PE=3 SV=1
A3D6B7	4.47e-165	7	472	6	457	Glycosyl hydrolase family 109 protein OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) OX=325240 GN=Sbal_2793 PE=3 SV=1
A6WQ58	6.34e-165	7	472	6	457	Glycosyl hydrolase family 109 protein OS=Shewanella baltica (strain OS185) OX=402882 GN=Shew185_2813 PE=3 SV=1
Q0HKG4	2.56e-164	7	472	6	457	Glycosyl hydrolase family 109 protein 1 OS=Shewanella sp. (strain MR-4) OX=60480 GN=Shewmr4_1375 PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as TAT

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000000	0.000000	0.000000	0.999979	0.000003	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000002453_00807.