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CAZyme Information: MGYG000002445_00506

You are here: Home > Sequence: MGYG000002445_00506

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Clostridium_Q sp003024715
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Clostridium_Q; Clostridium_Q sp003024715
CAZyme ID MGYG000002445_00506
CAZy Family GH73
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
844 MGYG000002445_1|CGC4 85982.26 7.9355
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002445 3277016 Isolate South Korea Asia
Gene Location Start: 558012;  End: 560546  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002445_00506.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd14256 Dockerin_I 1.37e-18 786 842 1 57
Type I dockerin repeat domain. Bacterial cohesin domains bind to a complementary protein domain named dockerin, and this interaction is required for the formation of the cellulosome, a cellulose-degrading complex. The cellulosome consists of scaffoldin, a noncatalytic scaffolding polypeptide, that comprises repeating cohesion modules and a single carbohydrate-binding module (CBM). Specific calcium-dependent interactions between cohesins and dockerins appear to be essential for cellulosome assembly. This subfamily represents type I dockerins, which are responsible for anchoring a variety of enzymatic domains to the complex.
pfam00404 Dockerin_1 2.17e-13 787 842 1 56
Dockerin type I repeat. The dockerin repeat is the binding partner of the cohesin domain pfam00963. The cohesin-dockerin interaction is the crucial interaction for complex formation in the cellulosome. The dockerin repeats, each bearing homology to the EF-hand calcium-binding loop bind calcium.
COG4193 LytD 7.00e-13 415 563 106 245
Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism].
pfam08239 SH3_3 4.55e-12 51 111 1 54
Bacterial SH3 domain.
smart00287 SH3b 1.20e-10 43 108 1 59
Bacterial SH3 domain homologues.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
CBK77705.1 1.18e-251 9 813 7 837
QRV21758.1 6.67e-213 32 810 21 746
ADL03932.1 6.67e-213 32 810 21 746
ANU49989.1 5.74e-208 9 673 7 687
QQR01104.1 5.74e-208 9 673 7 687

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6FXO_A 1.05e-08 415 563 98 244
ChainA, Bifunctional autolysin [Staphylococcus aureus subsp. aureus Mu50]
2KQ8_A 8.25e-08 48 110 7 60
ChainA, Cell wall hydrolase [[Bacillus thuringiensis] serovar konkukian]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q8CPQ1 4.15e-09 415 563 1189 1335
Bifunctional autolysin OS=Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) OX=176280 GN=atl PE=3 SV=1
O33635 9.39e-09 415 563 1189 1335
Bifunctional autolysin OS=Staphylococcus epidermidis OX=1282 GN=atl PE=1 SV=1
Q5HQB9 9.39e-09 415 563 1189 1335
Bifunctional autolysin OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) OX=176279 GN=atl PE=3 SV=1
Q931U5 3.17e-07 415 563 1102 1248
Bifunctional autolysin OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) OX=158878 GN=atl PE=1 SV=2
Q99V41 3.17e-07 415 563 1102 1248
Bifunctional autolysin OS=Staphylococcus aureus (strain N315) OX=158879 GN=atl PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.002027 0.996535 0.000699 0.000259 0.000219 0.000202

TMHMM  Annotations      download full data without filtering help

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