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CAZyme Information: MGYG000002424_01877

You are here: Home > Sequence: MGYG000002424_01877

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Monoglobus pectinilyticus
Lineage Bacteria; Firmicutes_A; Clostridia; Monoglobales; Monoglobaceae; Monoglobus; Monoglobus pectinilyticus
CAZyme ID MGYG000002424_01877
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
896 99683.53 4.6186
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002424 2757122 Isolate New Zealand Oceania
Gene Location Start: 2219740;  End: 2222430  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002424_01877.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 85 287 1.3e-63 0.994535519125683

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
smart00656 Amb_all 1.71e-12 87 261 3 170
Amb_all domain.
COG3866 PelB 2.24e-05 12 252 3 246
Pectate lyase [Carbohydrate transport and metabolism].
pfam00544 Pec_lyase_C 0.006 95 238 29 174
Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AUO20016.1 0.0 1 896 1 896
AUO20150.1 7.05e-233 29 787 37 796
AUO18496.1 2.35e-229 19 884 17 898
AUO19604.1 4.17e-229 19 791 25 799
AUO20302.1 4.64e-191 17 787 17 837

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q5B297 1.80e-44 20 457 9 410
Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1
Q0CLG7 6.80e-43 29 457 18 413
Probable pectate lyase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyC PE=3 SV=1
B8NQQ7 9.49e-38 29 407 18 360
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
B0XMA2 3.23e-37 31 293 21 253
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1
Q4WL88 3.23e-37 31 293 21 253
Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.004039 0.873462 0.120818 0.000910 0.000416 0.000310

TMHMM  Annotations      download full data without filtering help

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