logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000002406_01261

You are here: Home > Sequence: MGYG000002406_01261

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Corynebacterium pacaense
Lineage Bacteria; Actinobacteriota; Actinomycetia; Mycobacteriales; Mycobacteriaceae; Corynebacterium; Corynebacterium pacaense
CAZyme ID MGYG000002406_01261
CAZy Family GT87
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
433 MGYG000002406_12|CGC9 47821.73 9.2035
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002406 3028764 Isolate not provided not provided
Gene Location Start: 1331523;  End: 1332824  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002406_01261.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT87 90 338 6.9e-55 0.9956709956709957

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam09594 GT87 2.09e-36 90 338 1 237
Glycosyltransferase family 87. The enzymes in this family are glycosyltransferases. PimE is involved in phosphatidylinositol mannoside (PIM) synthesis, a major class of glycolipids in all mycobacteria. PimE is a polyprenol-phosphate-mannose-dependent mannosyltransferase that transfers the fifth mannose of PIM. The family also includes alpha(1-->3) arabinofuranosyltransferase, invloved in the synthesis of of mycobacterial arabinogalactan.
PRK13375 pimE 1.38e-22 34 347 22 318
mannosyltransferase; Provisional
COG5650 COG5650 0.006 76 232 136 282
Uncharacterized membrane protein [Function unknown].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BAC18882.1 8.61e-211 20 430 15 425
BAU96512.1 2.64e-199 11 430 20 437
AMA00644.1 1.07e-197 24 430 27 433
AGG67273.1 3.29e-197 2 430 5 429
QDX78831.1 4.35e-197 24 430 27 433

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P9WMZ8 3.80e-38 13 424 6 405
Polyprenol-phosphate-mannose-dependent alpha-(1-2)-phosphatidylinositol mannoside mannosyltransferase OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=MT2236 PE=3 SV=1
P9WMZ9 3.80e-38 13 424 6 405
Polyprenol-phosphate-mannose-dependent alpha-(1-2)-phosphatidylinositol mannoside mannosyltransferase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=Rv2181 PE=1 SV=1
A0R036 1.74e-37 31 378 26 374
Polyprenol-phosphate-mannose-dependent alpha-(1-2)-phosphatidylinositol mannoside mannosyltransferase OS=Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) OX=246196 GN=MSMEG_4247 PE=1 SV=1
P9WN00 3.93e-14 59 425 70 412
Polyprenol-phosphate-mannose-dependent alpha-(1-2)-phosphatidylinositol pentamannoside mannosyltransferase OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=pimE PE=3 SV=1
P9WN01 3.93e-14 59 425 70 412
Polyprenol-phosphate-mannose-dependent alpha-(1-2)-phosphatidylinositol pentamannoside mannosyltransferase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=pimE PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000025 0.000005 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      download full data without filtering help

start end
31 51
86 106
116 138
143 165
169 187
194 216
220 242
296 318
333 355
368 390
405 427