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CAZyme Information: MGYG000002403_05718

You are here: Home > Sequence: MGYG000002403_05718

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Robinsoniella peoriensis
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Robinsoniella; Robinsoniella peoriensis
CAZyme ID MGYG000002403_05718
CAZy Family GH106
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1470 164248.06 5.428
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002403 7202103 Isolate not provided not provided
Gene Location Start: 15331;  End: 19743  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002403_05718.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 114 840 3.6e-62 0.6407766990291263
CBM32 857 973 3.2e-16 0.9193548387096774

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17132 Glyco_hydro_106 1.67e-35 118 833 1 777
alpha-L-rhamnosidase.
COG5492 YjdB 1.42e-17 1176 1373 135 324
Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only].
COG5492 YjdB 3.02e-16 1105 1288 158 326
Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only].
pfam02368 Big_2 1.29e-12 1222 1292 5 75
Bacterial Ig-like domain (group 2). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in bacterial and phage surface proteins such as intimins.
pfam02368 Big_2 1.43e-10 1391 1464 3 75
Bacterial Ig-like domain (group 2). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in bacterial and phage surface proteins such as intimins.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BCI61176.1 1.79e-206 109 1120 30 1043
QGA23530.1 2.19e-130 117 1120 25 731
QGT72311.1 1.11e-122 86 838 8 601
BCG54873.1 4.09e-121 117 1119 25 749
AZQ59168.1 1.45e-100 110 1118 32 755

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P33747 1.15e-13 1326 1470 60 202
Uncharacterized protein CA_P0160 OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) OX=272562 GN=CA_P0160 PE=3 SV=2
A0A3R0A696 6.17e-09 1215 1297 270 352
Alpha-L-arabinofuranosidase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=blArafA PE=1 SV=1
Q086E4 1.32e-06 1146 1470 156 473
Ice-binding protein 1 OS=Shewanella frigidimarina (strain NCIMB 400) OX=318167 GN=Sfri_1018 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999655 0.000328 0.000008 0.000001 0.000000 0.000012

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002403_05718.