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CAZyme Information: MGYG000002369_01166
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Clostridioides difficile | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Peptostreptococcales; Peptostreptococcaceae; Clostridioides; Clostridioides difficile | |||||||||||
| CAZyme ID | MGYG000002369_01166 | |||||||||||
| CAZy Family | GH73 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 1270170; End: 1271993 Strand: + | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG4193 | LytD | 1.08e-52 | 386 | 607 | 41 | 245 | Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism]. |
| COG3103 | YgiM | 6.22e-19 | 88 | 222 | 15 | 149 | Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family [General function prediction only]. |
| smart00047 | LYZ2 | 3.07e-15 | 448 | 587 | 10 | 137 | Lysozyme subfamily 2. Eubacterial enzymes distantly related to eukaryotic lysozymes. |
| COG3103 | YgiM | 1.13e-14 | 169 | 304 | 29 | 154 | Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family [General function prediction only]. |
| COG3103 | YgiM | 1.20e-14 | 34 | 222 | 34 | 195 | Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family [General function prediction only]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QGS39241.1 | 0.0 | 1 | 607 | 1 | 607 |
| AVB67374.1 | 0.0 | 1 | 607 | 1 | 607 |
| AVB52955.1 | 0.0 | 1 | 607 | 1 | 607 |
| AYD17291.1 | 0.0 | 1 | 607 | 1 | 607 |
| AVB40675.1 | 0.0 | 1 | 607 | 1 | 607 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5WQW_A | 6.23e-41 | 395 | 606 | 41 | 269 | X-raystructure of catalytic domain of autolysin from Clostridium perfringens [Clostridium perfringens str. 13] |
| 6FXO_A | 4.84e-30 | 393 | 607 | 37 | 244 | ChainA, Bifunctional autolysin [Staphylococcus aureus subsp. aureus Mu50] |
| 4PI7_A | 5.10e-26 | 430 | 587 | 65 | 209 | ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PI9_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PIA_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50] |
| 4PI8_A | 3.27e-25 | 430 | 587 | 65 | 209 | ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50] |
| 6FXP_A | 4.31e-23 | 386 | 588 | 39 | 228 | ChainA, Uncharacterized protein [Staphylococcus aureus subsp. aureus Mu50],6FXP_B Chain B, Uncharacterized protein [Staphylococcus aureus subsp. aureus Mu50] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P39848 | 1.83e-35 | 395 | 607 | 681 | 880 | Beta-N-acetylglucosaminidase OS=Bacillus subtilis (strain 168) OX=224308 GN=lytD PE=1 SV=1 |
| Q5HQB9 | 1.11e-30 | 395 | 607 | 1130 | 1335 | Bifunctional autolysin OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) OX=176279 GN=atl PE=3 SV=1 |
| O33635 | 1.11e-30 | 395 | 607 | 1130 | 1335 | Bifunctional autolysin OS=Staphylococcus epidermidis OX=1282 GN=atl PE=1 SV=1 |
| Q8CPQ1 | 1.96e-30 | 395 | 607 | 1130 | 1335 | Bifunctional autolysin OS=Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) OX=176280 GN=atl PE=3 SV=1 |
| O32041 | 1.54e-28 | 9 | 299 | 15 | 316 | Putative N-acetylmuramoyl-L-alanine amidase YrvJ OS=Bacillus subtilis (strain 168) OX=224308 GN=yrvJ PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000418 | 0.998590 | 0.000255 | 0.000258 | 0.000240 | 0.000207 |