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CAZyme Information: MGYG000002359_01618

You are here: Home > Sequence: MGYG000002359_01618

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Mycobacterium tuberculosis
Lineage Bacteria; Actinobacteriota; Actinomycetia; Mycobacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis
CAZyme ID MGYG000002359_01618
CAZy Family GT2
CAZyme Description putative protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
261 MGYG000002359_3|CGC1 28778.76 7.9082
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002359 4387829 Isolate Sweden Europe
Gene Location Start: 85725;  End: 86510  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002359_01618.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG1216 GT2 1.17e-39 1 257 11 287
Glycosyltransferase, GT2 family [Carbohydrate transport and metabolism].
cd04186 GT_2_like_c 1.16e-36 10 200 1 166
Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.
cd02526 GT2_RfbF_like 3.14e-11 36 207 28 221
RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
CCC43878.1 1.03e-196 1 261 1 261
ACT25526.1 1.03e-196 1 261 1 261
ALB18703.1 1.03e-196 1 261 1 261
AMP28269.1 1.03e-196 1 261 1 261
AFM49842.1 1.03e-196 1 261 1 261

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P64868 2.06e-197 1 261 1 261
Uncharacterized protein Mb1552 OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) OX=233413 GN=wbbL2 PE=4 SV=1
P9WLV2 2.06e-197 1 261 1 261
Uncharacterized protein MT1576 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=wbbL2 PE=4 SV=1
P9WLV3 2.06e-197 1 261 1 261
Uncharacterized protein Rv1525 OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=wbbL2 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.805124 0.193903 0.000392 0.000246 0.000140 0.000220

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002359_01618.