logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000002344_00881

You are here: Home > Sequence: MGYG000002344_00881

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Acinetobacter baumannii
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; Acinetobacter baumannii
CAZyme ID MGYG000002344_00881
CAZy Family GH23
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1754 192811.65 8.8598
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002344 3953404 Isolate United States North America
Gene Location Start: 915847;  End: 921111  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002344_00881.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
TIGR02675 tape_meas_nterm 6.70e-19 137 211 1 75
tape measure domain. Proteins containing this domain are strictly bacterial, including bacteriophage and prophage regions of bacterial genomes. Most members are 800 to 1800 amino acids long, making them among the longest predicted proteins of their respective phage genomes, where they are encoded in tail protein regions. This roughly 80-residue domain described here usually begins between residue 100 and 250. Many members are known or predicted to act as phage tail tape measure proteins, a minor tail component that regulates tail length.
COG5281 COG5281 6.25e-06 123 398 1 295
Phage-related minor tail protein [Mobilome: prophages, transposons].
COG5281 COG5281 9.17e-05 985 1453 330 759
Phage-related minor tail protein [Mobilome: prophages, transposons].
PTZ00121 PTZ00121 3.68e-04 990 1305 1437 1743
MAEBL; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ATP86570.1 0.0 1 1754 1 1599
AYY17958.1 0.0 1 1754 1 1599
QJG71946.1 0.0 1 1754 1 1599
APQ84973.1 0.0 1 1754 1 1599
AIL78607.1 0.0 1 1754 1 1599

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O64330 7.00e-07 1292 1446 618 759
Tape measure protein OS=Escherichia phage N15 OX=40631 GN=gene 16 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000028 0.000022 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002344_00881.