You are browsing environment: HUMAN GUT
CAZyme Information: MGYG000002343_02205
You are here: Home > Sequence: MGYG000002343_02205
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Acinetobacter courvalinii | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; Acinetobacter courvalinii | |||||||||||
| CAZyme ID | MGYG000002343_02205 | |||||||||||
| CAZy Family | GT19 | |||||||||||
| CAZyme Description | Lipid-A-disaccharide synthase | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | Start: 383767; End: 385140 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GT19 | 73 | 437 | 2.8e-128 | 0.9858757062146892 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PRK00025 | lpxB | 8.42e-158 | 71 | 454 | 2 | 375 | lipid-A-disaccharide synthase; Reviewed |
| COG0763 | LpxB | 2.76e-139 | 71 | 454 | 2 | 379 | Lipid A disaccharide synthetase [Cell wall/membrane/envelope biogenesis]. |
| pfam02684 | LpxB | 1.07e-108 | 73 | 432 | 1 | 353 | Lipid-A-disaccharide synthetase. This is a family of lipid-A-disaccharide synthetases, EC:2.4.2.128. These enzymes catalyze the reaction: UDP-2,3-bis(3-hydroxytetradecanoyl) glucosamine + 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate <=> UDP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6 -beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate. These enzymes catalyze the fist disaccharide step in the synthesis of lipid-A-disaccharide. |
| TIGR00215 | lpxB | 2.84e-97 | 73 | 437 | 8 | 363 | lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides] |
| PRK14089 | PRK14089 | 1.70e-51 | 94 | 411 | 22 | 309 | lipid-A-disaccharide synthase. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QHH97072.1 | 1.43e-294 | 33 | 457 | 1 | 425 |
| QHH95220.1 | 4.84e-292 | 46 | 457 | 1 | 412 |
| AWA48010.1 | 5.00e-281 | 33 | 456 | 1 | 424 |
| QDJ92387.1 | 1.13e-280 | 33 | 456 | 1 | 424 |
| QHI32729.1 | 1.13e-280 | 33 | 456 | 1 | 424 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5W8N_A | 5.12e-89 | 68 | 451 | 4 | 378 | LipidA Disaccharide Synthase (LpxB)-6 solubilizing mutations [Escherichia coli BL21(DE3)] |
| 5W8S_A | 5.12e-89 | 68 | 451 | 4 | 378 | LipidA Disaccharide Synthase (LpxB)-7 solubilizing mutations [Escherichia coli BL21(DE3)],5W8X_A Lipid A Disaccharide Synthase (LpxB)-7 solubilizing mutations-Bound to UDP [Escherichia coli BL21(DE3)] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q6FA07 | 1.13e-220 | 69 | 454 | 10 | 395 | Lipid-A-disaccharide synthase OS=Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1) OX=62977 GN=lpxB PE=3 SV=1 |
| A1SYV0 | 4.26e-102 | 67 | 454 | 1 | 377 | Lipid-A-disaccharide synthase OS=Psychromonas ingrahamii (strain 37) OX=357804 GN=lpxB PE=3 SV=1 |
| A3QG90 | 1.26e-98 | 75 | 456 | 11 | 381 | Lipid-A-disaccharide synthase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) OX=323850 GN=lpxB PE=3 SV=1 |
| Q9KPW5 | 3.23e-98 | 67 | 454 | 1 | 377 | Lipid-A-disaccharide synthase OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) OX=243277 GN=lpxB PE=3 SV=1 |
| C3LQ19 | 3.23e-98 | 67 | 454 | 1 | 377 | Lipid-A-disaccharide synthase OS=Vibrio cholerae serotype O1 (strain M66-2) OX=579112 GN=lpxB PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.999465 | 0.000562 | 0.000021 | 0.000001 | 0.000001 | 0.000002 |