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CAZyme Information: MGYG000002342_02693

You are here: Home > Sequence: MGYG000002342_02693

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Acinetobacter variabilis
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; Acinetobacter variabilis
CAZyme ID MGYG000002342_02693
CAZy Family CBM50
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
200 MGYG000002342_110|CGC1 21713.48 5.7365
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002342 3410950 Isolate United States North America
Gene Location Start: 8322;  End: 8924  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002342_02693.

CDD Domains      help

MGYG000002342_02693 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BCT87802.1 2.45e-136 1 200 185 384
QQN87955.1 2.45e-136 1 200 185 384
AUX91095.1 2.45e-136 1 200 185 384
QKW81450.1 2.45e-136 1 200 185 384
QKT99007.1 2.07e-130 1 200 185 384

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6VE2_O 4.26e-27 1 196 151 341
ChainO, LysM domain-containing protein [Pseudomonas aeruginosa PAO1],6VE2_P Chain P, LysM domain-containing protein [Pseudomonas aeruginosa PAO1],6VE2_Q Chain Q, LysM domain-containing protein [Pseudomonas aeruginosa PAO1],6VE2_R Chain R, LysM domain-containing protein [Pseudomonas aeruginosa PAO1],6VE2_S Chain S, LysM domain-containing protein [Pseudomonas aeruginosa PAO1],6VE2_T Chain T, LysM domain-containing protein [Pseudomonas aeruginosa PAO1],6VE2_U Chain U, LysM domain-containing protein [Pseudomonas aeruginosa PAO1]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000064 0.000001 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002342_02693.