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CAZyme Information: MGYG000002339_02130

You are here: Home > Sequence: MGYG000002339_02130

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Lacticaseibacillus saniviri
Lineage Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lacticaseibacillus; Lacticaseibacillus saniviri
CAZyme ID MGYG000002339_02130
CAZy Family GT83
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
710 75718.32 10.5322
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002339 2435520 Isolate not provided not provided
Gene Location Start: 24029;  End: 26161  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002339_02130.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT83 4 225 3.8e-31 0.40555555555555556

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG1807 ArnT 2.79e-37 1 675 1 523
4-amino-4-deoxy-L-arabinose transferase or related glycosyltransferase of PMT family [Cell wall/membrane/envelope biogenesis].
pfam13231 PMT_2 2.17e-27 63 221 1 159
Dolichyl-phosphate-mannose-protein mannosyltransferase. This family contains members that are not captured by pfam02366.
pfam02366 PMT 8.76e-05 77 218 76 223
Dolichyl-phosphate-mannose-protein mannosyltransferase. This is a family of Dolichyl-phosphate-mannose-protein mannosyltransferase proteins EC:2.4.1.109. These proteins are responsible for O-linked glycosylation of proteins, they catalyze the reaction:- Dolichyl phosphate D-mannose + protein <=> dolichyl phosphate + O-D-mannosyl-protein. Also in this family is Drosophila rotated abdomen protein which is a putative mannosyltransferase. This family appears to be distantly related to pfam02516 (A Bateman pers. obs.). This family also contains sequences from ArnTs (4-amino-4-deoxy-L-arabinose lipid A transferase). They catalyze the addition of 4-amino-4-deoxy-l-arabinose (l-Ara4N) to the lipid A moiety of the lipopolysaccharide. This is a critical modification enabling bacteria (e.g. Escherichia coli and Salmonella typhimurium) to resist killing by antimicrobial peptides such as polymyxins. Members such as undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase are predicted to have 12 trans-membrane regions. The N-terminal portion of these proteins is hypothesized to have a conserved glycosylation activity which is shared between distantly related oligosaccharyltransferases ArnT and PglB families.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QHU89858.1 6.73e-81 8 675 273 886
QHU90800.1 1.73e-73 8 675 273 883
QUB37647.1 1.82e-73 13 678 210 780
QLF52252.1 6.27e-72 8 675 273 888
QJU11362.1 6.27e-72 8 675 273 888

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O34575 2.46e-183 2 686 4 672
Putative mannosyltransferase YkcB OS=Bacillus subtilis (strain 168) OX=224308 GN=ykcB PE=3 SV=2
P37483 5.17e-183 1 707 1 682
Putative mannosyltransferase YycA OS=Bacillus subtilis (strain 168) OX=224308 GN=yycA PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.993732 0.000911 0.002864 0.000007 0.000005 0.002527

TMHMM  Annotations      download full data without filtering help

start end
7 26
80 102
109 128
138 155
162 184
204 225
366 388
398 415
431 450
454 473
485 507
511 530
537 556