CAZyme Information: MGYG000002295_01124

Basic Information

• Species: Ruminococcus_C callidus
• Lineage: Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Ruminococcus_C; Ruminococcus_C callidus
• CAZyme ID: MGYG000002295_01124
• CAZy Family: CBM79
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1488	MGYG000002295_4|CGC4	159888.21	4.1027

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002295	2957494	Isolate	China	Asia

• Gene Location: Start: 173356; End: 177822 Strand: +

Full Sequence      

MKMKKFLSSLTAGVMAATTIFTSALVTPMMSLAATAADDAPIAFLHIQSGDGDWSLNNYK
AGTGTDATIDKSGSYEVSVKRGNWGDALSSYNFFDLCVQDPDLYGGKSLYKKITIDSVKI
GETTHELNQEYTTFTPSSVQSASDEWDFTCNKLAIDSTGWDMPAAGEVISVSFTVELANE
VTTTTTTSETTAETTAETTVASSETTVASSETTATSAVTTATTAEEKGVKKITVGKTYSE
LLKDAQKADPKEGMIGWKWADFGITNSNVVKKVVVNVSSDKEIGTYNYMFGSSTQKAPDY
WTQTTQENKTLGKSGEFTWDITKTVDATIQKEYDGSLKFGAWGDGTYEDFTVDSVVIYTD
DATITTTAATTVTTQPTTTVSAKYTKELTPKAEEDKGTDGKASNTKVEFDPMGAYKAIAY
YTVKTNDKNTSGAFGTWNDSLPEGEEWQSTEFKDLAVPANKQVIVSYDIPKTVGETVQFM
VYYPKFGDVTIDKIVLCFDEDPDQTTTSTTVTTETVATTEESTVSATTEETTVTSKETTK
ETTKETTVTTVVTTADTTAKTTASTSTEASAETSKATETSASAATTTAKQTTATKADTTV
VTTTKSIGTTTTEAPKGKGIIFKVDEAQVKTASNYAKIPLSVLVENYVDAQGFNFALEVP
EVTSKILTIYKNPKNKKDYGYRDVYVSGDLAPSPQNLKGYEANGQDMSVEPSKRWMYFQW
TSSTSTITISGDKVIDINCTIAENAVDIAKEYGLELQTDENGDSYYLFPVNFAEYQKVNW
DFEGTHGDGYLAPNRQYIDENGTDIATTDVVYYNGGIRVYTDAQTETTTTDTTTTTTTTE
EKDINLDIDEVFVYPSEKDATSLKNYTLGVKVTAKEGVDATSYGINCVVNLPEATAKLYT
IPSKLLKKRAFVVNDFGSGIPNANDFIAYKDGTSTITDGSDRWIRFIGARSAEGATDPTK
MNQVFRMIFNVPDKDTVQALADEYGLTLQTGEYDGKTVEYYEFPVDWAPNGSDKLPSGTT
MVDVKRFNYLNGEGVTGEDIFDEMVGLKDGAIRVIMNDVVETTETTTATTTTTTTATTTT
TATSAATTTTTEEPQTTTATEATTVTTTTAATTTTTTAATTTTTEEPIVTTTKATTTTTT
TEATTVTTEATTATATSTSAGPTTTSTSATTTTVTESETTTTKATTTATTEELPDFSKKT
TASTTEELPDFSKKTTTSTTTTTTTTTEETTEATTEATTEETTTTPAAVSSTTEATTTEA
TTTVTEATTTTENTTASTEATTTTEVTTTTAEAELEIEVNPDANFYLSIDGRNFNAADLV
KSATVNGESVMDDLTFGAESPKALFDSEGKAYVDTDLDILYKGEKVATAKVYIGVKGDTD
LSGKVEATDMYYSSYYIARQGAGIKDAKLLDGTEHAQDENLEKLSFFLTDIDTESKAGEN
SADGKLEATDIFYQAYYVALVGAGHKSTTWDNPVCPDLKNLKGSMWAE

Enzyme Prediction     

No EC number prediction in MGYG000002295_01124.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
CBM79	248	356	4.7e-32	0.9727272727272728

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam18522	DUF5620	8.63e-23	249	358	1	119	Domain of unknown function (DUF5620). This is a domain of unknown function predicted to be a carbohydrate binding module.
pfam18244	CttA_N	0.004	1302	1355	1	64	Cellulose-binding protein CttA N-terminal domain. This is the N-terminal domain of cellulose-binding protein CttA present in Ruminococcus flavefaciens. CttA mediates attachment of the bacterial substrate via two carbohydrate-binding modules. The domain is known as the X-module and lacks a true hydrophobic core. Unlike the X-modules in other types of CohE-XDoc complexes it does not contribute to the binding surface. This X-module appears to serve as an extended spacer, which separates the cellulose-binding modules at the N terminus of CttA and the bacterial cell wall. The domain does not share structural similarity with other known X-modules from cellulolytic bacteria but does show similarity to G5-1 module of StrH from S. pneumoniae.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ERJ93725.1	0.0	1	1488	69	1541
CDE12955.1	4.41e-89	1	1488	1	1317
ERJ89368.1	2.44e-22	254	360	91	198
CDF00679.1	1.92e-18	254	359	1	106
EWM53237.1	5.27e-17	397	496	508	599

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
4V1L_A	1.20e-18	237	357	15	129	Highresolution structure of a novel carbohydrate binding module from glycoside hydrolase family 9 (Cel9A) from Ruminococcus flavefaciens FD-1 [Ruminococcus flavefaciens FD-1],4V1L_B High resolution structure of a novel carbohydrate binding module from glycoside hydrolase family 9 (Cel9A) from Ruminococcus flavefaciens FD-1 [Ruminococcus flavefaciens FD-1],4V1L_C High resolution structure of a novel carbohydrate binding module from glycoside hydrolase family 9 (Cel9A) from Ruminococcus flavefaciens FD-1 [Ruminococcus flavefaciens FD-1]
4D3L_A	1.05e-17	237	357	15	129	SeMetstructure of a novel carbohydrate binding module from glycoside hydrolase family 9 (Cel9A) from Ruminococcus flavefaciens FD-1 in the orthorhombic form [Ruminococcus flavefaciens FD-1],4D3L_B SeMet structure of a novel carbohydrate binding module from glycoside hydrolase family 9 (Cel9A) from Ruminococcus flavefaciens FD-1 in the orthorhombic form [Ruminococcus flavefaciens FD-1],4D3L_C SeMet structure of a novel carbohydrate binding module from glycoside hydrolase family 9 (Cel9A) from Ruminococcus flavefaciens FD-1 in the orthorhombic form [Ruminococcus flavefaciens FD-1],4V1K_A SeMet structure of a novel carbohydrate binding module from glycoside hydrolase family 9 (Cel9A) from Ruminococcus flavefaciens FD-1 [Ruminococcus flavefaciens FD-1]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.003546	0.994343	0.000326	0.001220	0.000303	0.000233

TMHMM  Annotations     

start	end
7	29