CAZyme Information: MGYG000002282_01371

Basic Information

• Species: Parabacteroides gordonii
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides; Parabacteroides gordonii
• CAZyme ID: MGYG000002282_01371
• CAZy Family: GH163
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
734	MGYG000002282_3|CGC2	83299.95	6.0656

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002282	6348794	Isolate	China	Asia

• Gene Location: Start: 68893; End: 71097 Strand: -

Full Sequence      

MKYKCKLLGIALAAWLCVGGAYSQMTLVKDGKPVSRIVIPEISQVNQQAATLLQDFVQRI
SGSSLPVIEGKKAKKGDVVIGQGDATGLLEDGFRLSTSDGILRISSGGDKGTIYGVVTLL
EDYLGVSYYTAHTYMLDQRKTIEIPELDRAENPAFRYRQTQSYAVKEDPIYKMWFRLEEP
NEVFAGNLWVHTFDKILPSSEFGEKHPEYYSFINGERRPGAASQWCLTNPEVFEIVSQRV
DSIFKANPGKNMISISQNDGNFTNCACPDCKALDELEGGSPSGSLIHFLNKLAARFPDKE
FSTLAYLFSMHPPKQIKPLPNVNIMLCDIDCKREVPLTDNESGRDFMKAMEGWSKISNNI
FVWDYGINFDCYLAPFPNFPILKRNIQLFKDHHVTMHFSQIAGSKCGTFTEMRSYIVSKL
MWNPSLDTDSLMKSFMKGYYGAAAPYLYDYEKLLEGALLGSKVDLWIFDSPVSHKNGMLN
TNCLKRYNELFDKAEAAVAGNRQLLDRVRTERLTLQYSELEVARAERGHDVDEIKAKLAL
FRERAAYYQLPTLNERHNSPLEYCDLYEKRFLPKSEKNFAKNAKITWIEAPSGKYAEKGT
EMLIDELYGGTAFVESWVGWEGKNAAFILDLGKEEEVSVIESDFLHQLGQWVFLPKKVSY
STSLNNQDYQFFGKTDIAEDQSIEVKFFQARNESSQPVKARYIKVEIDGVNTCPSWHCGV
GHPGWFFMDEIRVL

Enzyme Prediction     

No EC number prediction in MGYG000002282_01371.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH163	197	450	5.6e-103	0.9880478087649402

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam16126	DUF4838	1.46e-136	189	450	1	262	Domain of unknown function (DUF4838). This family consists of several uncharacterized proteins found in various Bacteroides and Chloroflexus species. The function of this family is unknown.
pfam02838	Glyco_hydro_20b	1.28e-07	35	120	24	105	Glycosyl hydrolase family 20, domain 2. This domain has a zincin-like fold.
pfam00754	F5_F8_type_C	2.25e-04	616	716	25	121	F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
cd21375	cwf21_SRRM2	6.80e-04	489	542	2	57	cwf21 domain found in serine/arginine repetitive matrix protein 2. Serine/arginine repetitive matrix protein 2 (SRRM2) is also called 300 kDa nuclear matrix antigen, serine/arginine-rich splicing factor-related nuclear matrix protein of 300 kDa, SR-related nuclear matrix protein of 300 kDa, Ser/Arg-related nuclear matrix protein of 300 kDa, splicing coactivator subunit SRm300, or Tax-responsive enhancer element-binding protein 803 (TaxREB803). It is required for pre-mRNA splicing as component of the spliceosome. It contains a cwf21 domain at the N-terminus. The cwf21 domain is involved in mRNA splicing; it binds directly to the spliceosomal protein Prp8.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ANU63563.1	0.0	17	733	15	731
ASB38357.1	0.0	17	733	15	731
QQR09102.1	0.0	17	733	15	731
AAO76142.1	0.0	10	733	12	733
ALJ42190.1	0.0	10	733	12	733

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.009263	0.975233	0.014609	0.000318	0.000261	0.000276

TMHMM  Annotations     

start	end
7	26