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CAZyme Information: MGYG000002273_02458
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Bacteroides stercorirosoris | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides stercorirosoris | |||||||||||
| CAZyme ID | MGYG000002273_02458 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 39034; End: 40434 Strand: - | |||||||||||
Full Sequence Download help
| MNTMRKEVFI KILAVLGLAV SALLPAFGQY ATVNIDAPFP MEPIKEFIFP KKDFSIVQYG | 60 |
| AIKGGKVCNT DAIAKTIDAC NRAGGGRVLV PEGEWLTGPI HLKSNVNLYL AENAVLRFTD | 120 |
| TPSDYLPSVM TSWEGMECYN YSPLIYAFEC ENIAITGKGM LKPEMDTWKV WFARPEAHMN | 180 |
| ALKELYTMAS TDVPVEKREM AVGENHLRPH LIQFNRCRNI LLDGFKIRES PFWTVHMYMC | 240 |
| NGGIVRNLDV KAHGHNNDGI DLEMTRNFLV EDCTFDQGDD AVVIKAGRNR DAWRLNTPTE | 300 |
| NIVIRNCDIV EGHTLLGIGS EISGGIRNVY MHDCKVPQSV RRLFFVKTNH RRGAFVENIH | 360 |
| MENIKAGHVQ RVLEIDTDVL YQWKDLVPTY EERITRIDGI YMRNVTCTSA DAIYELKGDA | 420 |
| KLPARNIVIE DVYVGEVKDF VKKVNNTENV VEKNVSYSVL NRTGDK | 466 |
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 78 | 454 | 1.3e-73 | 0.963076923076923 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG5434 | Pgu1 | 1.26e-81 | 54 | 378 | 83 | 407 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| pfam00295 | Glyco_hydro_28 | 2.80e-15 | 209 | 432 | 85 | 301 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| PLN03003 | PLN03003 | 1.01e-11 | 54 | 334 | 24 | 257 | Probable polygalacturonase At3g15720 |
| PLN02218 | PLN02218 | 2.66e-10 | 55 | 434 | 69 | 408 | polygalacturonase ADPG |
| PLN02793 | PLN02793 | 2.78e-07 | 51 | 432 | 50 | 392 | Probable polygalacturonase |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QUT89993.1 | 1.44e-307 | 4 | 458 | 1 | 455 |
| ALJ58890.1 | 7.62e-307 | 4 | 458 | 8 | 462 |
| QGT69619.1 | 6.60e-282 | 11 | 460 | 3 | 452 |
| SCV08416.1 | 7.52e-269 | 28 | 457 | 27 | 456 |
| QRQ55807.1 | 7.52e-269 | 28 | 457 | 27 | 456 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5OLP_A | 4.43e-253 | 29 | 458 | 20 | 449 | Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482] |
| 3JUR_A | 7.37e-87 | 44 | 438 | 18 | 414 | Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima] |
| 2UVE_A | 5.79e-15 | 55 | 329 | 158 | 451 | Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica] |
| 4MXN_A | 7.74e-14 | 49 | 312 | 17 | 240 | Crystalstructure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_B Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_C Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_D Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P15922 | 6.04e-19 | 52 | 339 | 150 | 454 | Exo-poly-alpha-D-galacturonosidase OS=Dickeya chrysanthemi OX=556 GN=pehX PE=1 SV=1 |
| P27644 | 1.01e-15 | 210 | 373 | 26 | 190 | Polygalacturonase OS=Rhizobium radiobacter OX=358 GN=pgl PE=2 SV=1 |
| Q9LW07 | 5.09e-12 | 56 | 434 | 26 | 357 | Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g15720 PE=3 SV=1 |
| Q9FY19 | 2.07e-08 | 54 | 434 | 60 | 401 | Polygalacturonase OS=Juniperus ashei OX=13101 GN=JNA2 PE=1 SV=1 |
| Q7M1E7 | 2.09e-08 | 9 | 432 | 5 | 398 | Polygalacturonase OS=Chamaecyparis obtusa OX=13415 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.193055 | 0.801919 | 0.003496 | 0.000830 | 0.000329 | 0.000352 |
