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CAZyme Information: MGYG000002264_00452

You are here: Home > Sequence: MGYG000002264_00452

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UMGS363 sp900550695
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; UMGS363; UMGS363 sp900550695
CAZyme ID MGYG000002264_00452
CAZy Family GH5
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
572 63119.71 8.0837
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002264 2273272 MAG Peru South America
Gene Location Start: 21427;  End: 23145  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002264_00452.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH5 64 334 9.6e-96 0.9891304347826086

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00150 Cellulase 2.05e-67 59 336 11 271
Cellulase (glycosyl hydrolase family 5).
COG2730 BglC 1.05e-37 37 353 45 378
Aryl-phospho-beta-D-glucosidase BglC, GH1 family [Carbohydrate transport and metabolism].
NF033189 internalin_A 2.42e-17 403 550 277 420
class 1 internalin InlA. Internalins, as found in the intracellular human pathogen Listeria monocytogenes, are paralogous surface or secreted proteins with an N-terminal signal peptide, leucine-rich repeats, and usually a C-terminal LPXTG processing and cell surface anchoring site. See PMID:17764999 for a general discussion of internalins. Members of this family are internalin A (InlA), a class 1 (LPXTG-type) internalin.
sd00033 LRR_RI 7.44e-16 402 533 99 238
leucine-rich repeats, ribonuclease inhibitor (RI)-like subfamily. A leucine-rich repeat (LRR) is a structural protein motif of 20-30 amino acids that is unusually rich in the hydrophobic amino acid leucine. The conserved eleven-residue sequence motif (LxxLxLxxN/CxL) within the LRRs corresponds to the beta-strand and adjacent loop regions, whereas the remaining parts of the repeats are variable. LRRs fold together to form a solenoid protein domain, termed leucine-rich repeat domain. Leucine-rich repeats are usually involved in protein-protein interactions.
NF033189 internalin_A 1.15e-14 403 523 211 328
class 1 internalin InlA. Internalins, as found in the intracellular human pathogen Listeria monocytogenes, are paralogous surface or secreted proteins with an N-terminal signal peptide, leucine-rich repeats, and usually a C-terminal LPXTG processing and cell surface anchoring site. See PMID:17764999 for a general discussion of internalins. Members of this family are internalin A (InlA), a class 1 (LPXTG-type) internalin.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
CCO06082.1 1.40e-100 1 350 1 364
ADU86903.1 9.61e-98 34 366 77 412
ADL33047.1 1.74e-96 34 366 116 451
ADU21113.1 1.81e-94 4 353 6 360
BAA92146.1 1.81e-94 4 353 6 360

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6Q1I_A 2.79e-93 27 366 5 351
GH5-4broad specificity endoglucanase from Clostrdium longisporum [Clostridium longisporum],6Q1I_B GH5-4 broad specificity endoglucanase from Clostrdium longisporum [Clostridium longisporum]
6XSU_A 1.83e-90 32 345 9 330
GH5-4broad specificity endoglucanase from Ruminococcus flavefaciens [Ruminococcus flavefaciens],6XSU_B GH5-4 broad specificity endoglucanase from Ruminococcus flavefaciens [Ruminococcus flavefaciens]
6MQ4_A 7.97e-88 25 366 1 347
ChainA, cellulase [Acetivibrio cellulolyticus]
6PZ7_A 2.77e-86 34 365 7 334
GH5-4broad specificity endoglucanase from Clostridium acetobutylicum [Clostridium acetobutylicum ATCC 824]
6WQP_A 2.16e-84 34 366 14 354
GH5-4broad specificity endoglucanase from Ruminococcus champanellensis [Ruminococcus champanellensis],6WQP_B GH5-4 broad specificity endoglucanase from Ruminococcus champanellensis [Ruminococcus champanellensis],6WQV_A GH5-4 broad specificity endoglucanase from Ruminococcus champanellensis with bound cellotriose [Ruminococcus champanellensis],6WQV_B GH5-4 broad specificity endoglucanase from Ruminococcus champanellensis with bound cellotriose [Ruminococcus champanellensis],6WQV_C GH5-4 broad specificity endoglucanase from Ruminococcus champanellensis with bound cellotriose [Ruminococcus champanellensis],6WQV_D GH5-4 broad specificity endoglucanase from Ruminococcus champanellensis with bound cellotriose [Ruminococcus champanellensis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P54937 2.24e-91 27 366 30 376
Endoglucanase A OS=Clostridium longisporum OX=1523 GN=celA PE=1 SV=1
P23660 7.87e-88 26 369 17 364
Endoglucanase A OS=Ruminococcus albus OX=1264 GN=celA PE=1 SV=1
P23661 2.03e-84 35 351 70 383
Endoglucanase B OS=Ruminococcus albus OX=1264 GN=celB PE=3 SV=1
P16216 3.68e-84 35 354 68 384
Endoglucanase 1 OS=Ruminococcus albus OX=1264 GN=Eg I PE=1 SV=1
Q12647 3.51e-83 30 366 19 361
Endoglucanase B OS=Neocallimastix patriciarum OX=4758 GN=CELB PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000275 0.998903 0.000326 0.000172 0.000154 0.000141

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002264_00452.