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CAZyme Information: MGYG000002209_01518

You are here: Home > Sequence: MGYG000002209_01518

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; CAG-462;
CAZyme ID MGYG000002209_01518
CAZy Family PL10
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
707 81117.41 8.7358
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002209 3647221 MAG Spain Europe
Gene Location Start: 40663;  End: 42786  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002209_01518.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL10 61 352 4.8e-117 0.9965277777777778
CE8 405 664 4.8e-28 0.8611111111111112

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam09492 Pec_lyase 3.31e-169 61 353 1 289
Pectic acid lyase. Members of this family are isozymes of pectate lyase (EC:4.2.2.2), also called polygalacturonic transeliminase and alpha-1,4-D-endopolygalacturonic acid lyase.
TIGR02474 pec_lyase 1.17e-116 61 352 1 289
pectate lyase, PelA/Pel-15E family. Members of this family are isozymes of pectate lyase (EC 4.2.2.2), also called polygalacturonic transeliminase and alpha-1,4-D-endopolygalacturonic acid lyase. [Energy metabolism, Biosynthesis and degradation of polysaccharides]
pfam01095 Pectinesterase 5.23e-08 398 469 1 78
Pectinesterase.
COG4677 PemB 4.89e-07 391 670 75 385
Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism].
PLN02497 PLN02497 2.16e-06 386 498 30 128
probable pectinesterase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ALJ61703.1 0.0 1 707 1 707
QUT92735.1 0.0 1 706 1 706
QJR78975.1 0.0 34 707 40 713
ALK83448.1 0.0 34 707 40 713
QUT60181.1 0.0 34 707 40 713

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1R76_A 2.61e-59 24 359 57 404
ChainA, pectate lyase [Niveispirillum irakense]
1GXM_A 8.33e-53 46 344 29 314
Family10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus],1GXM_B Family 10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus],1GXN_A Family 10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus]
1GXO_A 1.12e-51 46 344 29 314
MutantD189A of Family 10 polysaccharide lyase from Cellvibrio cellulosa in complex with trigalaturonic acid [Cellvibrio japonicus]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.009392 0.737097 0.249663 0.003157 0.000381 0.000274

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002209_01518.