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CAZyme Information: MGYG000002203_00954

You are here: Home > Sequence: MGYG000002203_00954

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes;
CAZyme ID MGYG000002203_00954
CAZy Family GH2
CAZyme Description Beta-galactosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
910 104844.61 6.6085
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002203 2806770 MAG Spain Europe
Gene Location Start: 90316;  End: 93048  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002203_00954.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH2 29 476 1.2e-64 0.5066489361702128

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK10150 PRK10150 1.55e-18 30 326 14 296
beta-D-glucuronidase; Provisional
COG3250 LacZ 1.58e-14 95 465 66 444
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
pfam00703 Glyco_hydro_2 1.15e-06 199 306 1 106
Glycosyl hydrolases family 2. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.
pfam02837 Glyco_hydro_2_N 4.73e-06 31 163 4 135
Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. The domain binds the sugar moiety during the sugar-hydrolysis reaction.
PRK10340 ebgA 4.23e-05 96 452 113 471
cryptic beta-D-galactosidase subunit alpha; Reviewed

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
CBK63994.1 0.0 1 906 1 905
QPH40113.1 0.0 15 905 12 906
AZI26708.1 0.0 24 907 24 908
QIH37197.1 0.0 15 907 4 898
VTR43024.1 0.0 14 905 14 904

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3GM8_A 4.64e-16 35 461 13 430
ChainA, Glycoside hydrolase family 2, candidate beta-glycosidase [Phocaeicola vulgatus ATCC 8482]
5T98_A 6.57e-14 94 435 86 423
Crystalstructure of BuGH2Awt [Bacteroides uniformis],5T98_B Crystal structure of BuGH2Awt [Bacteroides uniformis],5T99_A Crystal structure of BuGH2Awt in complex with Galactoisofagomine [Bacteroides uniformis],5T99_B Crystal structure of BuGH2Awt in complex with Galactoisofagomine [Bacteroides uniformis]
6D8K_A 1.05e-12 30 512 37 509
Bacteroidesmultiple species beta-glucuronidase [Bacteroides ovatus],6D8K_B Bacteroides multiple species beta-glucuronidase [Bacteroides ovatus],6D8K_C Bacteroides multiple species beta-glucuronidase [Bacteroides ovatus],6D8K_D Bacteroides multiple species beta-glucuronidase [Bacteroides ovatus]
3K4A_A 1.84e-12 20 211 7 196
Crystalstructure of selenomethionine substituted E. coli beta-glucuronidase [Escherichia coli K-12],3K4A_B Crystal structure of selenomethionine substituted E. coli beta-glucuronidase [Escherichia coli K-12]
6LEM_B 3.17e-12 20 211 3 192
ChainB, Beta-D-glucuronidase [Escherichia coli]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P05804 1.74e-11 20 211 5 194
Beta-glucuronidase OS=Escherichia coli (strain K12) OX=83333 GN=uidA PE=1 SV=2
A1SWB8 1.71e-06 18 429 38 460
Beta-galactosidase OS=Psychromonas ingrahamii (strain 37) OX=357804 GN=lacZ PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000588 0.998209 0.000414 0.000244 0.000247 0.000254

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002203_00954.