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CAZyme Information: MGYG000002199_00794
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | UBA11940 sp900549005 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia_A; Christensenellales; Borkfalkiaceae; UBA11940; UBA11940 sp900549005 | |||||||||||
| CAZyme ID | MGYG000002199_00794 | |||||||||||
| CAZy Family | PL1 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 45; End: 2843 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL1 | 455 | 627 | 6.5e-47 | 0.8118811881188119 |
| CBM77 | 833 | 924 | 1.8e-25 | 0.8737864077669902 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG3866 | PelB | 9.54e-55 | 394 | 736 | 40 | 340 | Pectate lyase [Carbohydrate transport and metabolism]. |
| smart00656 | Amb_all | 8.91e-38 | 462 | 624 | 19 | 186 | Amb_all domain. |
| pfam18283 | CBM77 | 7.04e-32 | 816 | 926 | 1 | 108 | Carbohydrate binding module 77. This domain is the non-catalytic carbohydrate binding module 77 (CBM77) present in Ruminococcus flavefaciens. CBMs fulfil a critical targeting function in plant cell wall depolymerisation. In CBM77, a cluster of conserved basic residues (Lys1092, Lys1107 and Lys1162) confer calcium-independent recognition of homogalacturonan. |
| pfam00544 | Pec_lyase_C | 1.64e-22 | 462 | 624 | 38 | 211 | Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. |
| PHA03169 | PHA03169 | 1.68e-14 | 37 | 246 | 55 | 249 | hypothetical protein; Provisional |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AWK03841.1 | 3.80e-191 | 260 | 924 | 14 | 734 |
| ADL35105.1 | 4.58e-190 | 270 | 924 | 60 | 743 |
| ADU23076.1 | 5.86e-185 | 259 | 929 | 42 | 706 |
| AYN05640.1 | 1.21e-180 | 266 | 926 | 21 | 761 |
| AUS04335.1 | 1.44e-180 | 267 | 928 | 23 | 748 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3VMV_A | 6.72e-20 | 363 | 624 | 5 | 246 | Crystalstructure of pectate lyase Bsp165PelA from Bacillus sp. N165 [Bacillus sp. N16-5],3VMW_A Crystal structure of pectate lyase Bsp165PelA from Bacillus sp. N165 in complex with trigalacturonate [Bacillus sp. N16-5] |
| 1VBL_A | 8.81e-17 | 462 | 634 | 135 | 340 | Structureof the thermostable pectate lyase PL 47 [Bacillus sp. TS-47] |
| 5FU5_A | 4.10e-13 | 835 | 931 | 22 | 116 | Thecomplexity of the Ruminococcus flavefaciens cellulosome reflects an expansion in glycan recognition [Ruminococcus flavefaciens] |
| 5AMV_A | 2.33e-12 | 462 | 622 | 130 | 323 | Structuralinsights into the loss of catalytic competence in pectate lyase at low pH [Bacillus subtilis],5X2I_A Polygalacturonate Lyase by Fusing with a Self-assembling Amphipathic Peptide [Bacillus subtilis subsp. subtilis str. 168] |
| 1BN8_A | 2.61e-12 | 462 | 622 | 151 | 344 | BacillusSubtilis Pectate Lyase [Bacillus subtilis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q4WIT0 | 3.17e-16 | 466 | 650 | 97 | 282 | Probable pectate lyase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyA PE=3 SV=1 |
| B0XT32 | 3.17e-16 | 466 | 650 | 97 | 282 | Probable pectate lyase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyA PE=3 SV=1 |
| A1CYB8 | 1.39e-15 | 466 | 657 | 97 | 289 | Probable pectate lyase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyA PE=3 SV=1 |
| Q5AVN4 | 1.50e-15 | 462 | 639 | 101 | 277 | Pectate lyase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyA PE=1 SV=1 |
| B8NE46 | 1.55e-13 | 466 | 639 | 97 | 271 | Probable pectate lyase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as LIPO
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000000 | 0.000001 | 1.000040 | 0.000000 | 0.000000 | 0.000000 |