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CAZyme Information: MGYG000002154_02483
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | UBA5446 sp900546615 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Oscillospiraceae; UBA5446; UBA5446 sp900546615 | |||||||||||
| CAZyme ID | MGYG000002154_02483 | |||||||||||
| CAZy Family | GH23 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 24; End: 2357 Strand: + | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG4646 | COG4646 | 6.42e-75 | 115 | 634 | 1 | 540 | Adenine-specific DNA methylase, N12 class [Replication, recombination and repair]. |
| smart00487 | DEXDc | 3.49e-11 | 578 | 681 | 7 | 110 | DEAD-like helicases superfamily. |
| pfam04851 | ResIII | 5.27e-10 | 577 | 666 | 1 | 100 | Type III restriction enzyme, res subunit. |
| cd18011 | DEXDc_RapA | 1.06e-08 | 580 | 704 | 1 | 120 | DEXH-box helicase domain of RapA. In bacteria, RapA is an RNA polymerase (RNAP)-associated SWI2/SNF2 (switch/sucrose non-fermentable) protein that mediates RNAP recycling during transcription. The ATPase activity of RapA is stimulated by its interaction with RNAP and inhibited by its N-terminal domain. The conformational changes of RapA and its interaction with RNAP are essential for RNAP recycling. RapA is part of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region. |
| cd17926 | DEXHc_RE | 1.17e-07 | 580 | 656 | 1 | 93 | DEXH-box helicase domain of DEAD-like helicase restriction enzyme family proteins. This family is composed of helicase restriction enzymes and similar proteins such as TFIIH basal transcription factor complex helicase XPB subunit. These proteins are part of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ASV45029.1 | 3.96e-165 | 2 | 773 | 1736 | 2527 |
| QIW86704.1 | 7.33e-165 | 2 | 773 | 1804 | 2595 |
| QIW86628.1 | 7.33e-165 | 2 | 773 | 1804 | 2595 |
| AEY69616.1 | 4.57e-158 | 2 | 773 | 1877 | 2667 |
| AXF51455.1 | 5.32e-157 | 2 | 773 | 1970 | 2760 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q71TF8 | 2.66e-10 | 529 | 771 | 783 | 1059 | Defense against restriction protein B OS=Escherichia phage P1 OX=2886926 GN=darB PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000056 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |