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CAZyme Information: MGYG000002096_00527
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | NSJ-63 sp014384805 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia_A; Christensenellales; Christensenellaceae; NSJ-63; NSJ-63 sp014384805 | |||||||||||
| CAZyme ID | MGYG000002096_00527 | |||||||||||
| CAZy Family | GT39 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 8425; End: 12291 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GT39 | 876 | 1096 | 7.6e-54 | 0.9192825112107623 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG1928 | PMT1 | 1.02e-20 | 880 | 1285 | 50 | 693 | Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]. |
| pfam16192 | PMT_4TMC | 2.27e-17 | 1115 | 1265 | 10 | 180 | C-terminal four TMM region of protein-O-mannosyltransferase. PMT_4TMC is the C-terminal four membrane-pass region of protein-O-mannosyltransferases and similar enzymes. |
| pfam02366 | PMT | 5.16e-16 | 879 | 1096 | 22 | 241 | Dolichyl-phosphate-mannose-protein mannosyltransferase. This is a family of Dolichyl-phosphate-mannose-protein mannosyltransferase proteins EC:2.4.1.109. These proteins are responsible for O-linked glycosylation of proteins, they catalyze the reaction:- Dolichyl phosphate D-mannose + protein <=> dolichyl phosphate + O-D-mannosyl-protein. Also in this family is Drosophila rotated abdomen protein which is a putative mannosyltransferase. This family appears to be distantly related to pfam02516 (A Bateman pers. obs.). This family also contains sequences from ArnTs (4-amino-4-deoxy-L-arabinose lipid A transferase). They catalyze the addition of 4-amino-4-deoxy-l-arabinose (l-Ara4N) to the lipid A moiety of the lipopolysaccharide. This is a critical modification enabling bacteria (e.g. Escherichia coli and Salmonella typhimurium) to resist killing by antimicrobial peptides such as polymyxins. Members such as undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase are predicted to have 12 trans-membrane regions. The N-terminal portion of these proteins is hypothesized to have a conserved glycosylation activity which is shared between distantly related oligosaccharyltransferases ArnT and PglB families. |
| COG5542 | COG5542 | 2.99e-13 | 303 | 633 | 71 | 393 | Mannosyltransferase related to Gpi18 [Carbohydrate transport and metabolism]. |
| pfam13231 | PMT_2 | 3.53e-12 | 903 | 1046 | 2 | 136 | Dolichyl-phosphate-mannose-protein mannosyltransferase. This family contains members that are not captured by pfam02366. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AYH39702.1 | 8.18e-262 | 245 | 1286 | 11 | 1073 |
| QWT55655.1 | 3.37e-213 | 17 | 1285 | 3 | 1251 |
| ASA25569.1 | 5.74e-205 | 17 | 1285 | 3 | 1266 |
| QSF45552.1 | 2.23e-195 | 12 | 1285 | 1 | 1271 |
| AIQ39188.1 | 4.28e-192 | 13 | 1285 | 1 | 1277 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| L8F4Z2 | 1.31e-27 | 880 | 1285 | 67 | 515 | Probable dolichyl-phosphate-mannose--protein mannosyltransferase OS=Mycolicibacterium smegmatis (strain MKD8) OX=1214915 GN=pmt PE=3 SV=1 |
| P9WN04 | 4.50e-25 | 870 | 1285 | 64 | 521 | Probable dolichyl-phosphate-mannose--protein mannosyltransferase OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=pmt PE=3 SV=2 |
| P9WN05 | 4.50e-25 | 870 | 1285 | 64 | 521 | Probable dolichyl-phosphate-mannose--protein mannosyltransferase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=pmt PE=1 SV=2 |
| Q8NRZ6 | 1.85e-23 | 901 | 1285 | 97 | 519 | Probable dolichyl-phosphate-mannose--protein mannosyltransferase OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / BCRC 11384 / JCM 1318 / LMG 3730 / NCIMB 10025) OX=196627 GN=pmt PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.006268 | 0.992417 | 0.000592 | 0.000249 | 0.000222 | 0.000233 |
TMHMM Annotations download full data without filtering help
| start | end |
|---|---|
| 20 | 39 |
| 244 | 261 |
| 273 | 290 |
| 355 | 374 |
| 387 | 409 |
| 436 | 458 |
| 471 | 493 |
| 513 | 532 |
| 537 | 559 |
| 569 | 586 |
| 614 | 636 |
| 641 | 663 |
| 716 | 738 |
| 922 | 944 |
| 951 | 968 |
| 973 | 992 |
| 1004 | 1023 |
| 1027 | 1044 |
| 1071 | 1093 |
| 1157 | 1179 |
| 1192 | 1210 |
| 1215 | 1234 |
| 1247 | 1269 |