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CAZyme Information: MGYG000002093_00873

You are here: Home > Sequence: MGYG000002093_00873

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UBA5905 sp900763035
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Acutalibacteraceae; UBA5905; UBA5905 sp900763035
CAZyme ID MGYG000002093_00873
CAZy Family GH106
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
937 104971.44 4.8299
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002093 1760859 MAG Mongolia Asia
Gene Location Start: 13;  End: 2826  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002093_00873.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 2 594 1.3e-65 0.7439320388349514

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17132 Glyco_hydro_106 1.49e-11 110 569 401 872
alpha-L-rhamnosidase.
cd03143 A4_beta-galactosidase_middle_domain 0.002 393 467 15 85
A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. This group includes proteins similar to beta-galactosidase from Thermus thermophilus. Beta-Galactosidase hydrolyzes the beta-1,4-D-galactosidic linkage of lactose, as well as those of related chromogens, o-nitrophenyl-beta-D-galactopyranoside (ONP-Gal) and 5-bromo-4-chloro-3-indolyl-beta-D-galactoside (X-gal). This A4 beta-galactosidase middle domain lacks the catalytic triad of typical GATase1 domains. The reactive Cys residue found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow in typical GATase1 domains is not conserved in this group.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AIQ40096.1 1.52e-217 2 934 39 1019
AIQ57144.1 5.19e-215 2 934 39 1030
AIQ16803.1 7.73e-209 2 936 39 1027
AIQ45953.1 2.15e-208 2 934 39 1021
AVM45834.1 1.02e-206 2 934 38 1015

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000066 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002093_00873.