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CAZyme Information: MGYG000002080_02465
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Prevotella sp900544825 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp900544825 | |||||||||||
| CAZyme ID | MGYG000002080_02465 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 242; End: 1798 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 84 | 424 | 3.8e-49 | 0.9076923076923077 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG5434 | Pgu1 | 5.16e-26 | 55 | 351 | 83 | 403 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| pfam00295 | Glyco_hydro_28 | 7.15e-24 | 131 | 424 | 38 | 307 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| PLN02218 | PLN02218 | 2.38e-22 | 49 | 424 | 62 | 412 | polygalacturonase ADPG |
| PLN03003 | PLN03003 | 2.41e-18 | 50 | 385 | 19 | 328 | Probable polygalacturonase At3g15720 |
| PLN02188 | PLN02188 | 9.33e-15 | 51 | 361 | 33 | 325 | polygalacturonase/glycoside hydrolase family protein |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QNT65232.1 | 2.14e-302 | 2 | 468 | 6 | 477 |
| QEC72689.1 | 1.73e-73 | 45 | 473 | 51 | 445 |
| BAV07348.1 | 4.41e-66 | 39 | 475 | 39 | 440 |
| AYD47266.1 | 1.06e-54 | 25 | 443 | 12 | 414 |
| QEC57624.1 | 2.61e-52 | 44 | 443 | 30 | 416 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1BHE_A | 5.40e-22 | 70 | 432 | 26 | 373 | ChainA, POLYGALACTURONASE [Pectobacterium carotovorum] |
| 1IA5_A | 4.85e-12 | 151 | 424 | 72 | 325 | PolygalacturonaseFrom Aspergillus Aculeatus [Aspergillus aculeatus],1IB4_A Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus],1IB4_B Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P18192 | 1.19e-21 | 70 | 415 | 52 | 400 | Endo-polygalacturonase OS=Pectobacterium carotovorum subsp. carotovorum OX=555 GN=peh PE=3 SV=1 |
| P26509 | 3.93e-21 | 70 | 432 | 52 | 399 | Endo-polygalacturonase OS=Pectobacterium parmentieri OX=1905730 GN=pehA PE=1 SV=1 |
| Q9SFB7 | 3.55e-14 | 51 | 426 | 67 | 434 | Polygalacturonase QRT2 OS=Arabidopsis thaliana OX=3702 GN=QRT2 PE=1 SV=2 |
| O74213 | 3.40e-11 | 151 | 424 | 111 | 364 | Endopolygalacturonase I OS=Aspergillus aculeatus OX=5053 GN=pgaI PE=1 SV=1 |
| O23147 | 1.00e-10 | 52 | 329 | 65 | 333 | Polygalacturonase ADPG1 OS=Arabidopsis thaliana OX=3702 GN=ADPG1 PE=2 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000473 | 0.998550 | 0.000458 | 0.000166 | 0.000172 | 0.000156 |