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CAZyme Information: MGYG000002063_01376

You are here: Home > Sequence: MGYG000002063_01376

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella;
CAZyme ID MGYG000002063_01376
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1342 142006.22 4.4563
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002063 2224261 MAG China Asia
Gene Location Start: 2724;  End: 6752  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002063_01376.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 76 254 1.5e-47 0.9890710382513661

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd00063 FN3 1.20e-08 433 520 3 93
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
smart00060 FN3 1.54e-05 433 510 3 83
Fibronectin type 3 domain. One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
COG4625 COG4625 3.56e-05 874 1030 36 191
Uncharacterized conserved protein, contains a C-terminal beta-barrel porin domain [Function unknown].
PRK15319 PRK15319 1.76e-04 576 1042 664 1130
fibronectin-binding autotransporter adhesin ShdA.
PRK15319 PRK15319 3.07e-04 536 1046 574 1075
fibronectin-binding autotransporter adhesin ShdA.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AEV97716.1 1.75e-292 23 1069 29 1087
QCD38445.1 1.83e-134 17 524 19 565
QKD53272.1 1.58e-131 13 422 7 412
QUT73817.1 2.16e-131 15 528 13 564
CCT64558.1 8.33e-131 13 422 7 412

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A1DPF0 4.97e-116 26 422 22 414
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1
B0XMA2 6.83e-114 26 422 22 414
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1
Q4WL88 9.48e-114 26 422 22 414
Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1
B8NQQ7 3.41e-113 12 422 6 413
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q0CLG7 3.41e-113 15 422 13 413
Probable pectate lyase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000457 0.992722 0.006154 0.000229 0.000214 0.000199

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002063_01376.