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CAZyme Information: MGYG000002051_02441

You are here: Home > Sequence: MGYG000002051_02441

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella sp900546345
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp900546345
CAZyme ID MGYG000002051_02441
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
330 35789.65 7.3827
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002051 3257941 MAG China Asia
Gene Location Start: 22686;  End: 23678  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002051_02441.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 12 250 1.2e-44 0.6523076923076923

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 3.90e-25 1 177 226 395
Polygalacturonase [Carbohydrate transport and metabolism].
pfam00295 Glyco_hydro_28 1.01e-07 10 196 84 255
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
pfam13229 Beta_helix 3.67e-05 13 108 48 136
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
pfam13229 Beta_helix 0.001 13 108 2 89
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
PLN02793 PLN02793 0.003 13 87 179 258
Probable polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AGB28085.1 1.15e-163 2 312 149 459
AGA77909.1 5.40e-87 1 314 175 491
QYM80852.1 2.12e-86 8 317 199 510
BBB66938.1 9.28e-85 7 317 184 498
BBB60882.1 1.04e-84 7 317 175 489

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999921 0.000136 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002051_02441.