You are browsing environment: HUMAN GUT
CAZyme Information: MGYG000001998_01138
You are here: Home > Sequence: MGYG000001998_01138
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Lachnospira sp900552795 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Lachnospira; Lachnospira sp900552795 | |||||||||||
| CAZyme ID | MGYG000001998_01138 | |||||||||||
| CAZy Family | PL1 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | Start: 102155; End: 104137 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL1 | 395 | 585 | 2.7e-81 | 0.9897435897435898 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG3866 | PelB | 4.53e-48 | 344 | 650 | 27 | 341 | Pectate lyase [Carbohydrate transport and metabolism]. |
| smart00656 | Amb_all | 2.27e-36 | 398 | 589 | 1 | 190 | Amb_all domain. |
| pfam00544 | Pec_lyase_C | 1.68e-34 | 405 | 585 | 26 | 211 | Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. |
| pfam14200 | RicinB_lectin_2 | 1.31e-07 | 245 | 327 | 4 | 79 | Ricin-type beta-trefoil lectin domain-like. |
| pfam14200 | RicinB_lectin_2 | 3.29e-04 | 213 | 281 | 16 | 87 | Ricin-type beta-trefoil lectin domain-like. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QHZ48014.1 | 8.46e-117 | 204 | 658 | 32 | 486 |
| QSF99885.1 | 9.36e-116 | 205 | 658 | 33 | 486 |
| ARC69127.1 | 1.32e-115 | 205 | 658 | 33 | 486 |
| QFY37765.1 | 1.86e-115 | 205 | 658 | 33 | 486 |
| AYQ17483.1 | 1.86e-115 | 205 | 658 | 33 | 486 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3ZSC_A | 9.33e-08 | 368 | 562 | 23 | 212 | Catalyticfunction and substrate recognition of the pectate lyase from Thermotoga maritima [Thermotoga maritima] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P94449 | 3.70e-96 | 347 | 657 | 35 | 343 | Pectin lyase OS=Bacillus subtilis OX=1423 GN=pelB PE=1 SV=1 |
| O34819 | 2.45e-93 | 347 | 657 | 35 | 343 | Pectin lyase OS=Bacillus subtilis (strain 168) OX=224308 GN=pelB PE=3 SV=1 |
| P27027 | 4.33e-90 | 364 | 657 | 18 | 310 | Pectin lyase OS=Pseudomonas marginalis OX=298 GN=pnl PE=1 SV=2 |
| P24112 | 1.55e-78 | 364 | 657 | 18 | 312 | Pectin lyase OS=Pectobacterium carotovorum OX=554 GN=pnl PE=1 SV=1 |
| Q0CBV0 | 1.01e-21 | 353 | 605 | 38 | 288 | Probable pectate lyase B OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyB PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000237 | 0.999050 | 0.000242 | 0.000151 | 0.000143 | 0.000133 |