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CAZyme Information: MGYG000001940_01250

You are here: Home > Sequence: MGYG000001940_01250

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Ruminococcus sp002438605
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Ruminococcus; Ruminococcus sp002438605
CAZyme ID MGYG000001940_01250
CAZy Family CE8
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
617 68348.33 4.6501
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001940 2341596 MAG Denmark Europe
Gene Location Start: 351;  End: 2204  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

EC 3.-.-.-

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 50 367 2.7e-57 0.8888888888888888

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PLN02773 PLN02773 1.50e-32 50 353 14 263
pectinesterase
PLN02682 PLN02682 2.09e-31 21 337 43 311
pectinesterase family protein
PLN02432 PLN02432 2.11e-29 53 389 23 292
putative pectinesterase
PLN02497 PLN02497 2.33e-27 52 389 43 326
probable pectinesterase
pfam01095 Pectinesterase 5.80e-27 53 375 12 275
Pectinesterase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADU21605.1 4.61e-139 41 414 365 742
ADL49995.1 6.61e-114 7 393 5 404
QAV09174.1 1.02e-109 41 412 509 891
ADL52345.1 9.41e-106 41 445 508 913
BAV13168.1 9.62e-106 41 445 524 929

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1GQ8_A 1.55e-14 53 389 19 308
Pectinmethylesterase from Carrot [Daucus carota]
2NSP_A 6.31e-14 130 390 69 339
ChainA, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937]
5C1C_A 1.76e-13 208 389 117 295
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
5C1E_A 1.76e-13 208 389 117 295
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
3UW0_A 2.41e-13 58 367 45 342
Pectinmethylesterase from Yersinia enterocolitica [Yersinia enterocolitica subsp. enterocolitica 8081]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q9FM79 1.29e-18 55 359 94 345
Pectinesterase QRT1 OS=Arabidopsis thaliana OX=3702 GN=QRT1 PE=1 SV=1
Q9LVQ0 3.78e-17 53 353 17 263
Pectinesterase 31 OS=Arabidopsis thaliana OX=3702 GN=PME31 PE=1 SV=1
O04953 4.29e-15 209 339 101 232
Putative pectinesterase 52 OS=Arabidopsis thaliana OX=3702 GN=PME52 PE=2 SV=2
Q9ZQA3 7.45e-15 53 337 101 329
Probable pectinesterase 15 OS=Arabidopsis thaliana OX=3702 GN=PME15 PE=2 SV=1
A1DBT4 2.06e-14 208 367 142 296
Probable pectinesterase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pmeA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.014850 0.312726 0.671829 0.000252 0.000176 0.000162

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001940_01250.