You are browsing environment: HUMAN GUT
CAZyme Information: MGYG000001822_01644
You are here: Home > Sequence: MGYG000001822_01644
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia_A; Christensenellales; Christensenellaceae; ; | |||||||||||
| CAZyme ID | MGYG000001822_01644 | |||||||||||
| CAZy Family | GT39 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | Start: 1075; End: 4842 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GT39 | 871 | 1094 | 1.5e-52 | 0.9282511210762332 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG5542 | COG5542 | 5.54e-23 | 290 | 599 | 71 | 369 | Mannosyltransferase related to Gpi18 [Carbohydrate transport and metabolism]. |
| pfam16192 | PMT_4TMC | 1.67e-17 | 1110 | 1230 | 7 | 138 | C-terminal four TMM region of protein-O-mannosyltransferase. PMT_4TMC is the C-terminal four membrane-pass region of protein-O-mannosyltransferases and similar enzymes. |
| COG1928 | PMT1 | 3.08e-12 | 877 | 1090 | 50 | 264 | Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]. |
| COG1928 | PMT1 | 1.28e-11 | 1110 | 1242 | 505 | 647 | Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]. |
| pfam02366 | PMT | 1.43e-11 | 876 | 1094 | 22 | 241 | Dolichyl-phosphate-mannose-protein mannosyltransferase. This is a family of Dolichyl-phosphate-mannose-protein mannosyltransferase proteins EC:2.4.1.109. These proteins are responsible for O-linked glycosylation of proteins, they catalyze the reaction:- Dolichyl phosphate D-mannose + protein <=> dolichyl phosphate + O-D-mannosyl-protein. Also in this family is Drosophila rotated abdomen protein which is a putative mannosyltransferase. This family appears to be distantly related to pfam02516 (A Bateman pers. obs.). This family also contains sequences from ArnTs (4-amino-4-deoxy-L-arabinose lipid A transferase). They catalyze the addition of 4-amino-4-deoxy-l-arabinose (l-Ara4N) to the lipid A moiety of the lipopolysaccharide. This is a critical modification enabling bacteria (e.g. Escherichia coli and Salmonella typhimurium) to resist killing by antimicrobial peptides such as polymyxins. Members such as undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase are predicted to have 12 trans-membrane regions. The N-terminal portion of these proteins is hypothesized to have a conserved glycosylation activity which is shared between distantly related oligosaccharyltransferases ArnT and PglB families. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AYH39702.1 | 2.43e-251 | 234 | 1230 | 17 | 1019 |
| QWT55655.1 | 1.50e-202 | 64 | 1227 | 30 | 1195 |
| AIQ15817.1 | 5.88e-187 | 264 | 1230 | 14 | 975 |
| AIQ66842.1 | 5.13e-184 | 269 | 1230 | 19 | 975 |
| AIQ44967.1 | 2.87e-180 | 269 | 1230 | 14 | 969 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P9WN04 | 5.59e-22 | 877 | 1225 | 73 | 456 | Probable dolichyl-phosphate-mannose--protein mannosyltransferase OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=pmt PE=3 SV=2 |
| P9WN05 | 5.59e-22 | 877 | 1225 | 73 | 456 | Probable dolichyl-phosphate-mannose--protein mannosyltransferase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=pmt PE=1 SV=2 |
| L8F4Z2 | 6.97e-21 | 877 | 1226 | 67 | 451 | Probable dolichyl-phosphate-mannose--protein mannosyltransferase OS=Mycolicibacterium smegmatis (strain MKD8) OX=1214915 GN=pmt PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.006491 | 0.991965 | 0.000826 | 0.000240 | 0.000218 | 0.000222 |
TMHMM Annotations download full data without filtering help
| start | end |
|---|---|
| 23 | 42 |
| 228 | 247 |
| 260 | 277 |
| 292 | 311 |
| 318 | 337 |
| 342 | 364 |
| 371 | 388 |
| 392 | 411 |
| 420 | 442 |
| 457 | 479 |
| 492 | 514 |
| 529 | 548 |
| 555 | 574 |
| 578 | 593 |
| 598 | 620 |
| 630 | 652 |
| 708 | 730 |
| 919 | 941 |
| 970 | 992 |
| 1019 | 1041 |
| 1071 | 1093 |
| 1156 | 1178 |
| 1191 | 1208 |
| 1213 | 1235 |