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CAZyme Information: MGYG000001812_01227
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Verrucomicrobiota; Lentisphaeria; Victivallales; UBA1829; ; | |||||||||||
| CAZyme ID | MGYG000001812_01227 | |||||||||||
| CAZy Family | GH10 | |||||||||||
| CAZyme Description | Endo-1,4-beta-xylanase C | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 20136; End: 21152 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH10 | 1 | 289 | 1e-41 | 0.7821782178217822 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| smart00633 | Glyco_10 | 6.73e-40 | 1 | 288 | 21 | 263 | Glycosyl hydrolase family 10. |
| pfam00331 | Glyco_hydro_10 | 1.40e-34 | 2 | 288 | 65 | 308 | Glycosyl hydrolase family 10. |
| COG3693 | XynA | 2.04e-26 | 2 | 294 | 88 | 343 | Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AHF92621.1 | 2.24e-153 | 1 | 337 | 149 | 490 |
| AVM47074.1 | 1.10e-147 | 1 | 331 | 149 | 489 |
| QQZ02681.1 | 1.27e-137 | 1 | 332 | 156 | 489 |
| QGA28189.1 | 2.40e-121 | 1 | 337 | 159 | 503 |
| AWI10666.1 | 2.58e-113 | 1 | 331 | 136 | 473 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6FHE_A | 1.09e-20 | 1 | 288 | 75 | 338 | Highlyactive enzymes by automated modular backbone assembly and sequence design [synthetic construct] |
| 1VBR_A | 9.19e-18 | 2 | 299 | 72 | 327 | Crystalstructure of complex xylanase 10B from Thermotoga maritima with xylobiose [Thermotoga maritima],1VBR_B Crystal structure of complex xylanase 10B from Thermotoga maritima with xylobiose [Thermotoga maritima],1VBU_A Crystal structure of native xylanase 10B from Thermotoga maritima [Thermotoga maritima],1VBU_B Crystal structure of native xylanase 10B from Thermotoga maritima [Thermotoga maritima] |
| 3NIY_A | 2.64e-17 | 2 | 295 | 88 | 339 | Crystalstructure of native xylanase 10B from Thermotoga petrophila RKU-1 [Thermotoga petrophila RKU-1],3NIY_B Crystal structure of native xylanase 10B from Thermotoga petrophila RKU-1 [Thermotoga petrophila RKU-1],3NJ3_A Crystal structure of xylanase 10B from Thermotoga petrophila RKU-1 in complex with xylobiose [Thermotoga petrophila RKU-1],3NJ3_B Crystal structure of xylanase 10B from Thermotoga petrophila RKU-1 in complex with xylobiose [Thermotoga petrophila RKU-1] |
| 4W8L_A | 9.32e-15 | 1 | 290 | 67 | 343 | Structureof GH10 from Paenibacillus barcinonensis [Paenibacillus barcinonensis],4W8L_B Structure of GH10 from Paenibacillus barcinonensis [Paenibacillus barcinonensis],4W8L_C Structure of GH10 from Paenibacillus barcinonensis [Paenibacillus barcinonensis] |
| 5M0K_A | 8.59e-13 | 1 | 293 | 103 | 336 | CRYSTALSTRUCTURE of endo-1,4-beta-xylanase from Cellulomonas flavigena [Cellulomonas flavigena],5M0K_B CRYSTAL STRUCTURE of endo-1,4-beta-xylanase from Cellulomonas flavigena [Cellulomonas flavigena] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| A3DH97 | 1.87e-15 | 1 | 338 | 475 | 745 | Anti-sigma-I factor RsgI6 OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=rsgI6 PE=1 SV=1 |
| Q60041 | 2.37e-15 | 2 | 299 | 91 | 346 | Endo-1,4-beta-xylanase B OS=Thermotoga neapolitana OX=2337 GN=xynB PE=3 SV=1 |
| O69230 | 1.27e-13 | 1 | 290 | 433 | 709 | Endo-1,4-beta-xylanase C OS=Paenibacillus barcinonensis OX=198119 GN=xynC PE=1 SV=1 |
| P40944 | 2.58e-13 | 2 | 290 | 418 | 677 | Endo-1,4-beta-xylanase A OS=Caldicellulosiruptor sp. (strain Rt8B.4) OX=28238 GN=xynA PE=3 SV=1 |
| I1S3C6 | 1.59e-12 | 1 | 293 | 143 | 381 | Endo-1,4-beta-xylanase D OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=XYLD PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000064 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |