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CAZyme Information: MGYG000001805_01452
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; | |||||||||||
| CAZyme ID | MGYG000001805_01452 | |||||||||||
| CAZy Family | PL1 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 4898; End: 6097 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL1 | 59 | 269 | 5.2e-43 | 0.905940594059406 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG3866 | PelB | 3.08e-36 | 4 | 336 | 29 | 342 | Pectate lyase [Carbohydrate transport and metabolism]. |
| smart00656 | Amb_all | 1.31e-23 | 73 | 271 | 10 | 190 | Amb_all domain. |
| pfam00544 | Pec_lyase_C | 4.14e-11 | 75 | 267 | 30 | 211 | Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QYR11586.1 | 5.47e-93 | 1 | 341 | 40 | 362 |
| AZA64152.1 | 5.06e-78 | 32 | 337 | 69 | 363 |
| AZA49258.1 | 5.06e-78 | 32 | 337 | 69 | 363 |
| AWG26215.1 | 8.12e-77 | 32 | 337 | 58 | 352 |
| AZA53390.1 | 1.54e-76 | 32 | 337 | 68 | 362 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3ZSC_A | 7.99e-15 | 7 | 244 | 4 | 214 | Catalyticfunction and substrate recognition of the pectate lyase from Thermotoga maritima [Thermotoga maritima] |
| 5AMV_A | 6.92e-13 | 113 | 261 | 151 | 319 | Structuralinsights into the loss of catalytic competence in pectate lyase at low pH [Bacillus subtilis],5X2I_A Polygalacturonate Lyase by Fusing with a Self-assembling Amphipathic Peptide [Bacillus subtilis subsp. subtilis str. 168] |
| 1BN8_A | 7.49e-13 | 113 | 261 | 172 | 340 | BacillusSubtilis Pectate Lyase [Bacillus subtilis] |
| 3KRG_A | 9.25e-13 | 113 | 261 | 151 | 319 | ChainA, Pectate lyase [Bacillus subtilis] |
| 2BSP_A | 1.78e-12 | 113 | 261 | 172 | 340 | ChainA, PROTEIN (PECTATE LYASE) [Bacillus subtilis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| B1L969 | 1.47e-18 | 7 | 244 | 29 | 239 | Pectate trisaccharide-lyase OS=Thermotoga sp. (strain RQ2) OX=126740 GN=pelA PE=3 SV=1 |
| Q9WYR4 | 3.73e-18 | 7 | 244 | 31 | 241 | Pectate trisaccharide-lyase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=pelA PE=1 SV=1 |
| Q0CBV0 | 3.71e-17 | 9 | 240 | 36 | 231 | Probable pectate lyase B OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyB PE=3 SV=1 |
| Q00645 | 5.77e-16 | 9 | 337 | 37 | 326 | Pectate lyase plyB OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyB PE=1 SV=1 |
| Q2TZY0 | 1.93e-15 | 32 | 337 | 48 | 326 | Probable pectate lyase B OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyB PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000046 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |