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CAZyme Information: MGYG000001789_01801

You are here: Home > Sequence: MGYG000001789_01801

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola sp002161565
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola sp002161565
CAZyme ID MGYG000001789_01801
CAZy Family GH171
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
391 MGYG000001789_29|CGC2 43985.91 8.9305
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001789 3544186 MAG Denmark Europe
Gene Location Start: 19377;  End: 20552  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001789_01801.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH171 45 386 9.4e-114 0.9971830985915493

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07075 DUF1343 4.53e-171 47 386 2 362
Protein of unknown function (DUF1343). This family consists of several hypothetical bacterial proteins of around 400 residues in length. The function of this family is unknown.
COG3876 YbbC 7.29e-91 3 386 6 409
Uncharacterized conserved protein YbbC, DUF1343 family [Function unknown].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADY34660.1 3.21e-218 1 386 3 388
QUT57045.1 1.72e-185 1 386 1 385
ALK86231.1 1.72e-185 1 386 1 385
VDS02522.1 1.08e-184 25 386 5 368
QJR69303.1 1.41e-184 10 386 7 385

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4JJA_A 2.05e-110 24 388 4 370
Crystalstructure of a DUF1343 family protein (BF0379) from Bacteroides fragilis NCTC 9343 at 1.30 A resolution [Bacteroides fragilis NCTC 9343]
4K05_A 1.23e-50 40 386 28 398
Crystalstructure of a DUF1343 family protein (BF0371) from Bacteroides fragilis NCTC 9343 at 1.65 A resolution [Bacteroides fragilis NCTC 9343],4K05_B Crystal structure of a DUF1343 family protein (BF0371) from Bacteroides fragilis NCTC 9343 at 1.65 A resolution [Bacteroides fragilis NCTC 9343]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P40407 8.97e-73 36 386 48 414
Uncharacterized protein YbbC OS=Bacillus subtilis (strain 168) OX=224308 GN=ybbC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.002119 0.997003 0.000274 0.000188 0.000182 0.000197

TMHMM  Annotations      download full data without filtering help

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