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CAZyme Information: MGYG000001767_00308
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | RC9 sp000432655 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; UBA932; RC9; RC9 sp000432655 | |||||||||||
| CAZyme ID | MGYG000001767_00308 | |||||||||||
| CAZy Family | GH54 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 98123; End: 101257 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH54 | 41 | 368 | 1.5e-130 | 0.990506329113924 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam09206 | ArabFuran-catal | 8.15e-167 | 41 | 367 | 1 | 314 | Alpha-L-arabinofuranosidase B, catalytic. Members of this family, which are present in fungal alpha-L-arabinofuranosidase B, adopt a beta-sandwich fold similar to that of Concanavalin A-like lectins/glucanase. The beta-sandwich fold consists of two anti-parallel beta-sheets with seven and and six strands, respectively. In addition, there are four helices outside of the beta-strands. The beta-sandwich strands are closely packed and curved with a jelly roll topology, creating a small catalytic pocket. The domain catalyzes the hydrolysis of alpha-1,2-, alpha-1,3- and alpha-1,5-L-arabinofuranosidic bonds in L-arabinose-containing hemicelluloses such as arabinoxylan and L-arabinan. |
| pfam00932 | LTD | 1.42e-10 | 484 | 588 | 1 | 95 | Lamin Tail Domain. The lamin-tail domain (LTD), which has an immunoglobulin (Ig) fold, is found in Nuclear Lamins, Chlo1887 from Chloroflexus, and several bacterial proteins where it occurs with membrane associated hydrolases of the metallo-beta-lactamase,synaptojanin, and calcineurin-like phosphoesterase superfamilies. |
| pfam10633 | NPCBM_assoc | 3.56e-05 | 389 | 470 | 1 | 78 | NPCBM-associated, NEW3 domain of alpha-galactosidase. The English-language version of the first reference can be found on pages 388-399 of the above. This domain has been named NEW3 but its actual function is not known. It is found on proteins which are bacterial galactosidases. The domain is associated with the NPCBM family, pfam08305, a novel putative carbohydrate binding module found at the N-terminus of glycosyl hydrolases. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ACB75541.1 | 0.0 | 1 | 990 | 1 | 981 |
| QOY90219.1 | 0.0 | 21 | 990 | 17 | 1022 |
| QHS50453.1 | 0.0 | 37 | 990 | 38 | 1046 |
| AXC15854.1 | 0.0 | 37 | 990 | 40 | 1046 |
| ACO33152.1 | 2.92e-283 | 62 | 990 | 1 | 969 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1WD3_A | 1.09e-106 | 40 | 474 | 2 | 430 | Crystalstructure of arabinofuranosidase [Aspergillus luchuensis],1WD4_A Crystal structure of arabinofuranosidase complexed with arabinose [Aspergillus luchuensis],6SXS_AAA Chain AAA, Alpha-L-arabinofuranosidase B [Aspergillus luchuensis] |
| 6SXT_A | 1.12e-106 | 40 | 474 | 3 | 431 | GH54a-l-arabinofuranosidase soaked with aziridine inhibitor [Aspergillus luchuensis IFO 4308] |
| 6SXR_A | 2.95e-106 | 40 | 474 | 2 | 430 | E221Qmutant of GH54 a-l-arabinofuranosidase soaked with 4-nitrophenyl a-l-arabinofuranoside [Aspergillus luchuensis IFO 4308] |
| 2D43_A | 8.02e-106 | 40 | 474 | 2 | 430 | ChainA, alpha-L-arabinofuranosidase B [Aspergillus luchuensis],2D44_A Chain A, alpha-L-arabinofuranosidase B [Aspergillus luchuensis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q4WL66 | 1.08e-109 | 40 | 474 | 27 | 455 | Probable alpha-L-arabinofuranosidase B OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=abfB PE=3 SV=1 |
| Q92455 | 4.94e-108 | 40 | 373 | 22 | 341 | Alpha-L-arabinofuranosidase OS=Hypocrea jecorina OX=51453 GN=abf1 PE=2 SV=1 |
| P48792 | 1.34e-107 | 40 | 373 | 22 | 341 | Arabinofuranosidase/B-xylosidase OS=Trichoderma koningii OX=97093 GN=xyl1 PE=3 SV=1 |
| O74288 | 4.95e-107 | 40 | 408 | 25 | 389 | Alpha-L-arabinofuranosidase B OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=abfB PE=1 SV=1 |
| Q0CEE5 | 8.54e-107 | 40 | 377 | 27 | 351 | Probable alpha-L-arabinofuranosidase B OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=abfB PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.016717 | 0.981799 | 0.000620 | 0.000361 | 0.000247 | 0.000227 |
