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CAZyme Information: MGYG000001750_00409

You are here: Home > Sequence: MGYG000001750_00409

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola ilei
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola ilei
CAZyme ID MGYG000001750_00409
CAZy Family PL10
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
540 62074.39 5.4096
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001750 2839699 MAG Sweden Europe
Gene Location Start: 88867;  End: 90489  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 4.2.2.2

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL10 122 405 1.3e-130 0.9963636363636363

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
TIGR02474 pec_lyase 4.73e-19 122 386 1 265
pectate lyase, PelA/Pel-15E family. Members of this family are isozymes of pectate lyase (EC 4.2.2.2), also called polygalacturonic transeliminase and alpha-1,4-D-endopolygalacturonic acid lyase. [Energy metabolism, Biosynthesis and degradation of polysaccharides]
pfam09492 Pec_lyase 7.15e-17 122 382 1 261
Pectic acid lyase. Members of this family are isozymes of pectate lyase (EC:4.2.2.2), also called polygalacturonic transeliminase and alpha-1,4-D-endopolygalacturonic acid lyase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADY38157.1 2.91e-313 5 539 2 536
QJR66990.1 7.50e-293 1 540 1 537
QJR71330.1 7.50e-293 1 540 1 537
QUT87327.1 7.50e-293 1 540 1 537
QJR62731.1 7.50e-293 1 540 1 537

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1R76_A 2.51e-13 106 318 78 304
ChainA, pectate lyase [Niveispirillum irakense]
1GXM_A 2.14e-10 115 387 37 300
Family10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus],1GXM_B Family 10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus],1GXN_A Family 10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus]
1GXO_A 2.15e-09 115 387 37 300
MutantD189A of Family 10 polysaccharide lyase from Cellvibrio cellulosa in complex with trigalaturonic acid [Cellvibrio japonicus]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.299888 0.683568 0.007638 0.007510 0.000643 0.000720

TMHMM  Annotations      download full data without filtering help

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