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CAZyme Information: MGYG000001748_00196

You are here: Home > Sequence: MGYG000001748_00196

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species CAG-56 sp900762665
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; CAG-56; CAG-56 sp900762665
CAZyme ID MGYG000001748_00196
CAZy Family GH106
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1287 MGYG000001748_2|CGC1 142526.36 5.5048
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001748 4218051 MAG Sweden Europe
Gene Location Start: 20832;  End: 24695  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001748_00196.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 507 1003 3.2e-64 0.5400485436893204
GH106 48 468 8.2e-62 0.39805825242718446

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17132 Glyco_hydro_106 2.00e-46 168 799 282 870
alpha-L-rhamnosidase.
COG5492 YjdB 5.78e-22 1036 1193 174 324
Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only].
pfam02368 Big_2 1.26e-14 1045 1118 2 75
Bacterial Ig-like domain (group 2). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in bacterial and phage surface proteins such as intimins.
smart00635 BID_2 3.99e-10 1043 1118 2 80
Bacterial Ig-like domain 2.
COG5492 YjdB 3.96e-09 1075 1196 130 254
Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AND79497.1 2.92e-143 37 1022 26 995
QTU60664.1 1.24e-139 44 1029 40 965
QTU52635.1 1.24e-139 44 1029 40 965
QTU44519.1 1.24e-139 44 1029 40 965
CBG74689.1 1.24e-139 44 1029 40 965

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6Q2F_A 7.09e-22 208 1002 408 1100
Structureof Rhamnosidase from Novosphingobium sp. PP1Y [Novosphingobium sp. PP1Y]
5MQM_A 1.40e-18 192 1002 346 1059
Glycosidehydrolase BT_0986 [Bacteroides thetaiotaomicron],5MQN_A Glycoside hydrolase BT_0986 [Bacteroides thetaiotaomicron]
5MWK_A 3.16e-18 192 1002 346 1059
Glycosidehydrolase BT_0986 [Bacteroides thetaiotaomicron]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P33747 3.75e-13 1041 1193 35 190
Uncharacterized protein CA_P0160 OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) OX=272562 GN=CA_P0160 PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.005611 0.985087 0.001579 0.006563 0.000636 0.000459

TMHMM  Annotations      download full data without filtering help

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