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CAZyme Information: MGYG000001701_01262

You are here: Home > Sequence: MGYG000001701_01262

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Corynebacterium afermentans
Lineage Bacteria; Actinobacteriota; Actinomycetia; Mycobacteriales; Mycobacteriaceae; Corynebacterium; Corynebacterium afermentans
CAZyme ID MGYG000001701_01262
CAZy Family GT87
CAZyme Description Alpha-(1->3)-arabinofuranosyltransferase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
394 42310.26 9.5095
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001701 2240769 Isolate France Europe
Gene Location Start: 60362;  End: 61546  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001701_01262.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT87 74 291 2.1e-19 0.9393939393939394

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam09594 GT87 1.21e-17 73 261 1 191
Glycosyltransferase family 87. The enzymes in this family are glycosyltransferases. PimE is involved in phosphatidylinositol mannoside (PIM) synthesis, a major class of glycolipids in all mycobacteria. PimE is a polyprenol-phosphate-mannose-dependent mannosyltransferase that transfers the fifth mannose of PIM. The family also includes alpha(1-->3) arabinofuranosyltransferase, invloved in the synthesis of of mycobacterial arabinogalactan.
PRK10715 flk 0.006 55 114 278 333
flagella biosynthesis regulator Flk.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QRP22241.1 1.42e-123 18 377 7 373
ARU46279.1 4.71e-122 4 374 32 402
SQH01790.1 4.71e-122 19 374 47 402
SQG50438.1 4.71e-122 19 374 47 402
SNV04228.1 4.71e-122 19 374 47 402

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q8NPB7 1.99e-117 18 373 26 381
Alpha-(1->3)-arabinofuranosyltransferase OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / BCRC 11384 / JCM 1318 / LMG 3730 / NCIMB 10025) OX=196627 GN=aftC PE=3 SV=1
A0QW28 7.79e-83 21 383 38 403
Alpha-(1->3)-arabinofuranosyltransferase OS=Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155) OX=246196 GN=aftC PE=1 SV=1
P9WMZ6 3.99e-77 19 383 40 407
Alpha-(1->3)-arabinofuranosyltransferase OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=aftC PE=3 SV=1
P9WMZ7 3.99e-77 19 383 40 407
Alpha-(1->3)-arabinofuranosyltransferase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=aftC PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000025 0.000031 0.000000 0.000000 0.000000 0.000001

TMHMM  Annotations      download full data without filtering help

start end
12 34
92 114
144 166
170 192
199 221
256 278
285 307
359 381