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CAZyme Information: MGYG000001661_01299

You are here: Home > Sequence: MGYG000001661_01299

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacteroides gallinarum
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides gallinarum
CAZyme ID MGYG000001661_01299
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
448 MGYG000001661_9|CGC1 50890.97 6.2391
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001661 3951783 MAG United States North America
Gene Location Start: 55205;  End: 56551  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001661_01299.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 173 431 8.6e-42 0.7538461538461538

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 1.34e-15 153 376 199 406
Polygalacturonase [Carbohydrate transport and metabolism].
pfam00295 Glyco_hydro_28 1.58e-08 175 429 88 307
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN02218 PLN02218 0.001 202 440 199 423
polygalacturonase ADPG
PLN03010 PLN03010 0.005 198 363 160 311
polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ALJ62050.1 1.03e-282 1 448 14 461
QUT92200.1 2.08e-282 1 448 14 461
QUU00181.1 3.16e-280 3 448 19 464
QUT34117.1 1.01e-276 3 448 19 464
AND18138.1 9.60e-275 1 448 17 464

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000081 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001661_01299.