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CAZyme Information: MGYG000001635_02366

You are here: Home > Sequence: MGYG000001635_02366

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Longibaculum sp900538465
Lineage Bacteria; Firmicutes; Bacilli; Erysipelotrichales; Erysipelatoclostridiaceae; Longibaculum; Longibaculum sp900538465
CAZyme ID MGYG000001635_02366
CAZy Family GH73
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
609 67781.39 6.064
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001635 2765607 MAG China Asia
Gene Location Start: 1131;  End: 2960  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001635_02366.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH73 312 429 4.5e-19 0.9765625

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd14256 Dockerin_I 2.66e-16 548 602 2 56
Type I dockerin repeat domain. Bacterial cohesin domains bind to a complementary protein domain named dockerin, and this interaction is required for the formation of the cellulosome, a cellulose-degrading complex. The cellulosome consists of scaffoldin, a noncatalytic scaffolding polypeptide, that comprises repeating cohesion modules and a single carbohydrate-binding module (CBM). Specific calcium-dependent interactions between cohesins and dockerins appear to be essential for cellulosome assembly. This subfamily represents type I dockerins, which are responsible for anchoring a variety of enzymatic domains to the complex.
pfam00404 Dockerin_1 1.13e-15 548 603 1 56
Dockerin type I repeat. The dockerin repeat is the binding partner of the cohesin domain pfam00963. The cohesin-dockerin interaction is the crucial interaction for complex formation in the cellulosome. The dockerin repeats, each bearing homology to the EF-hand calcium-binding loop bind calcium.
COG4193 LytD 2.67e-12 257 429 50 229
Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism].
pfam01832 Glucosaminidase 1.03e-10 312 384 1 84
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase. This family includes Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EC:3.2.1.96. As well as the flageller protein J that has been shown to hydrolyze peptidoglycan.
smart00047 LYZ2 7.98e-10 300 434 1 146
Lysozyme subfamily 2. Eubacterial enzymes distantly related to eukaryotic lysozymes.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUN13370.1 8.83e-248 4 578 3 588
QNM11023.1 3.49e-134 2 579 4 606
BCT44532.1 6.76e-93 153 582 170 610
QSI26463.1 2.42e-87 120 582 88 562
QEK17141.1 9.77e-87 137 539 96 495

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4Q2W_A 1.24e-19 187 424 74 278
CrystalStructure of pneumococcal peptidoglycan hydrolase LytB [Streptococcus pneumoniae TIGR4]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P59205 2.11e-18 187 424 442 646
Putative endo-beta-N-acetylglucosaminidase OS=Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) OX=170187 GN=lytB PE=1 SV=1
P59206 2.27e-18 187 424 486 690
Putative endo-beta-N-acetylglucosaminidase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) OX=171101 GN=lytB PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000340 0.998944 0.000215 0.000180 0.000157 0.000138

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001635_02366.