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CAZyme Information: MGYG000001608_02011

You are here: Home > Sequence: MGYG000001608_02011

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Gabonibacter sp900543425
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Marinifilaceae; Gabonibacter; Gabonibacter sp900543425
CAZyme ID MGYG000001608_02011
CAZy Family GT30
CAZyme Description 3-deoxy-D-manno-octulosonic acid transferase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
409 MGYG000001608_12|CGC1 46777.2 9.2528
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001608 3329116 MAG China Asia
Gene Location Start: 37918;  End: 39147  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001608_02011.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT30 41 208 5.3e-47 0.943502824858757

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG1519 KdtA 4.73e-74 29 407 20 415
3-deoxy-D-manno-octulosonic-acid transferase [Cell wall/membrane/envelope biogenesis].
PRK05749 PRK05749 7.91e-65 29 407 21 417
3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
pfam04413 Glycos_transf_N 7.43e-58 46 208 10 176
3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase). Members of this family transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Members of the family transfer UDP, ADP, GDP or CMP linked sugars. The Glycos_transf_N region is flanked at the N-terminus by a signal peptide and at the C-terminus by Glycos_transf_1 (pfam00534). The eukaryotic glycogen synthases may be distant members of this bacterial family.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AZS32062.1 2.12e-228 6 409 2 405
QRO50117.1 3.12e-228 6 409 3 406
ADY33207.1 1.51e-194 4 400 3 399
SNV38533.1 1.51e-194 4 400 3 399
BAX80324.1 1.48e-150 6 404 5 404

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2XCI_A 1.29e-30 52 376 43 344
Membrane-embeddedmonofunctional glycosyltransferase WaaA of Aquifex aeolicus, substrate-free form [Aquifex aeolicus],2XCI_B Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, substrate-free form [Aquifex aeolicus],2XCI_C Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, substrate-free form [Aquifex aeolicus],2XCI_D Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, substrate-free form [Aquifex aeolicus],2XCU_A Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, complex with CMP [Aquifex aeolicus],2XCU_B Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, complex with CMP [Aquifex aeolicus],2XCU_C Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, complex with CMP [Aquifex aeolicus],2XCU_D Membrane-embedded monofunctional glycosyltransferase WaaA of Aquifex aeolicus, complex with CMP [Aquifex aeolicus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q68XV7 1.18e-32 51 405 94 455
3-deoxy-D-manno-octulosonic acid transferase OS=Rickettsia typhi (strain ATCC VR-144 / Wilmington) OX=257363 GN=waaA PE=3 SV=1
Q9ZE58 9.99e-31 51 395 92 443
3-deoxy-D-manno-octulosonic acid transferase OS=Rickettsia prowazekii (strain Madrid E) OX=272947 GN=waaA PE=3 SV=1
Q4UND5 3.66e-30 36 404 82 457
3-deoxy-D-manno-octulosonic acid transferase OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) OX=315456 GN=waaA PE=3 SV=1
Q92JE9 3.66e-30 50 405 96 458
3-deoxy-D-manno-octulosonic acid transferase OS=Rickettsia conorii (strain ATCC VR-613 / Malish 7) OX=272944 GN=waaA PE=3 SV=1
O66663 4.92e-30 52 376 22 323
3-deoxy-D-manno-octulosonic acid transferase OS=Aquifex aeolicus (strain VF5) OX=224324 GN=kdtA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.436773 0.554399 0.006151 0.000853 0.000581 0.001239

TMHMM  Annotations      download full data without filtering help

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