CAZyme Information: MGYG000001591_01006

Basic Information

• Species: Parabacteroides timonensis
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides; Parabacteroides timonensis
• CAZyme ID: MGYG000001591_01006
• CAZy Family: GH141
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
713	MGYG000001591_11|CGC2	81735.58	6.4776

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001591	5999279	MAG	China	Asia

• Gene Location: Start: 43328; End: 45469 Strand: -

Full Sequence      

MKNIVLSILTLWFINPGVYADLVVYLSPTGSDDGKGTVESPYYSLNKAVEDRLDNRSETD
TLFIKVATGNYYMDRPFVIDRPSSRPIVIQSDGDVGKPCFIGGVSVKGWQKYGDKLYRAY
VPEVTRYGLEFEQLYVNGKRAILARTPNADWYYVKSSSETPFVEGVRFADYAVQRINLNQ
EDWLEMSKLQPSDLQQLKFRFYHKWDITHKRAAYVDVDSAFIYVNGKGMHPWNQIREGSR
YLMYDYMEALDTPGEWYLDRNTGYLYYMPYEGENMETAESFVPSLEQLVVFKGEAGSPVK
HVTFENISFQYSSYRMPEHGEEPMQAAAFTKAALSFDFSEYISLINCEIGHTGTYAVWFR
QECHNNKVEHCYLADLGAGGIKIGEPYFRSDNRKVTSHNVIHNNIITHVGRELPSGIGVA
IFHSSNNQVTHNEISDLYYSGVSVGWVWGYNDSPDLWTHHLNARGEAEFYQAKLKSPAVG
NIISYNHIHHIGWGELSDMGAVYTLGESEGTKVTNNVIHDVLSYDYGGWGLYTDEGSTGV
EMSNNLVYRCKSGGFHQHYGKNNKIENNIFAFGHYYQAQYTRAESHLSFHFKHNIILQEQ
GETLAGAWEIGLLDIDSNLYWHLNGEPKFGKYTFKEWKKLKEPHSVYANPLFKASLSDDY
TFLSTKAVRKIGFKPFDYSKAGVYGEKDWVEKARLNQQTLDEFKQKSQQRLKK

Enzyme Prediction     

No EC number prediction in MGYG000001591_01006.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH141	24	548	1.4e-100	0.9886148007590133

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam13229	Beta_helix	8.18e-13	363	568	8	156	Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
pfam13229	Beta_helix	4.98e-09	418	596	2	134	Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
pfam05048	NosD	1.83e-04	396	580	27	181	Periplasmic copper-binding protein (NosD). NosD is a periplasmic protein which is thought to insert copper into the exported reductase apoenzyme (NosZ). This region forms a parallel beta helix domain.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QGA25764.1	9.21e-197	1	705	1	684
SCM58138.1	1.81e-196	18	704	17	698
AKP49975.1	4.25e-192	24	703	38	703
AEL24383.1	4.35e-189	22	703	36	703
EAR00018.1	1.84e-181	2	703	3	689

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5MQP_A	3.06e-46	24	545	27	580	Glycosidehydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_B Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_C Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_D Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_E Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_F Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_G Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron],5MQP_H Glycoside hydrolase BT_1002 [Bacteroides thetaiotaomicron]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000354	0.998997	0.000176	0.000160	0.000152	0.000148

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001591_01006.