CAZyme Information: MGYG000001560_01716

Basic Information

• Species: Massilioclostridium coli
• Lineage: Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Massilioclostridium; Massilioclostridium coli
• CAZyme ID: MGYG000001560_01716
• CAZy Family: GH78
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1098		120901.56	4.0197

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001560	2985330	Isolate	not provided	not provided

• Gene Location: Start: 298267; End: 301563 Strand: -

Full Sequence      

MLNKIWYTAAYDVRANLKKDYMAAILMDRGDRHSWTGDAYPTQAASLVAFYNTDFVLENM
RYTSTRSNGIESYELYWVLSLIDYYEYTGDQQGVKSLLSEATKRLDHAYDIYGTNPNLGF
YGWDERLGAGFENPNIEENQNGYQLLSIQAWKDFSEVLRDLGETELADKYQGYADEKTAE
LQSDPKWYQKYGIHAFSDAVNADVLPEEAEAQIAETYFTDRINRLSYSPFNQYFILQAMG
ETGRYDDAISSILDLWGGQIEYGGTTFFETYRPQWNAELDQNGPVPNNQAGYTSLAHPWS
AGVLPWMNEEILGIHATQPGFTTFEVTPHLGRQLTRVSGSTMTPYGKIEVSFDTNTGDCS
VIVPEGTTAKIGIPKVEKEITSISMNGALQEIKQQDETFVYFEVSGGNYQFKVNYEGTTP
TYTAPVYKYDAEILGTDTTTQGNWGGVYGSEGYVLCAYNGGDVRVLPDYVEDIQYTKANS
TQWAENTNDVRALASNRLNLENRNIGALYTNDPIACQQTFTVDIQLKEQREYTVALYFVD
WDSDNTRQLAIEMFDGDTLNMVAPVKVVKDYSDGAYVIYQYDKSARFRIDQMRGANATLS
GIFFGTGMGDDPIITTTTVDDQDPQVSYEGNWTHDPIQGACNETFSYSNIAGNKASFQFE
GDGIALLASRESNRGIAQVIVDGTPYDKIDLYSPTIIRQSEVFRLDNLSEGTHTIEVVVT
GEQNPAASGCYVDVDAFVVSNIVQTVESVASQLETPIIAQDDTQLTMPEVPEGFIVELTN
TSHSEIISLDGKITNPETDTEVELTFTVSKDGRSATAVRTVSVPGKPAEPVETNKDILNK
VIAYAENAADSDEFDNVIADVQETFKAALDAAKLVAKDDMATQETVDTAWKALLTEIHKL
GFVKGDITSLEDLVALAETYDINDYVEAGQAEFQEALKAAQDLLADKDNAMAEEIEVAES
NLLNAMLNLRYKADKSILEKVIAEANEVDSNAYTAESYAVLEAAVAEANAVMANEDATQE
EVDAAVTSVQEAMKGLVAVEIPTNETPADNNADGTQTGQESTTTKANAAKTGDTTPVAGA
IAATIAGVVLLAIRKKNK

Enzyme Prediction     

No EC number prediction in MGYG000001560_01716.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH78	1	371	7.4e-59	0.7619047619047619

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam17389	Bac_rhamnosid6H	6.05e-08	1	307	12	336	Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam17390	Bac_rhamnosid_C	1.20e-06	313	380	1	70	Bacterial alpha-L-rhamnosidase C-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam17996	CE2_N	0.003	645	718	15	81	Carbohydrate esterase 2 N-terminal. This is the N-terminal beta-sheet domain with jelly roll topology found in CE2 acetyl-esterase from the bacterium Clostridium thermocellum. This enzyme displays dual activities, it catalyses the deacetylation of plant polysaccharides and also potentiates the activity of its appended cellulase catalytic module through its noncatalytic cellulose binding function. This N-terminal jelly-roll domain appears to extend the substrate/cellulose binding cleft of the catalytic domain in C.thermocellum.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QEC76313.1	1.00e-225	1	614	221	847
QGA24541.1	2.42e-205	2	604	213	819
QMW04815.1	1.27e-182	1	604	212	815
ATP56756.1	1.83e-181	2	604	210	817
ACT93515.1	3.06e-169	1	604	229	830

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3CIH_A	2.44e-21	2	356	311	680	Crystalstructure of a putative alpha-rhamnosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000057	0.000001	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

start	end
1074	1093