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CAZyme Information: MGYG000001560_00335

You are here: Home > Sequence: MGYG000001560_00335

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Massilioclostridium coli
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Massilioclostridium; Massilioclostridium coli
CAZyme ID MGYG000001560_00335
CAZy Family GH106
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1049 114578.82 4.0712
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001560 2985330 Isolate not provided not provided
Gene Location Start: 392309;  End: 395458  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001560_00335.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 67 992 1.6e-79 0.9393203883495146

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17132 Glyco_hydro_106 1.50e-23 232 769 356 869
alpha-L-rhamnosidase.
PRK10340 ebgA 3.63e-04 904 977 111 184
cryptic beta-D-galactosidase subunit alpha; Reviewed

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QIY75684.1 1.28e-110 49 995 58 991
BCL32862.1 1.76e-110 49 995 74 1007
BBA95732.1 1.11e-109 49 995 106 1052
SDO87046.1 1.15e-109 26 995 47 1003
ADI12183.1 1.35e-109 49 995 58 976

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6Q2F_A 5.03e-09 279 983 460 1108
Structureof Rhamnosidase from Novosphingobium sp. PP1Y [Novosphingobium sp. PP1Y]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000998 0.582083 0.415479 0.000624 0.000450 0.000336

TMHMM  Annotations      download full data without filtering help

start end
7 29
1027 1045