CAZyme Information: MGYG000001535_01005

Basic Information

• Species: Paenibacillus_A phocaensis
• Lineage: Bacteria; Firmicutes; Bacilli; Paenibacillales; Paenibacillaceae; Paenibacillus_A; Paenibacillus_A phocaensis
• CAZyme ID: MGYG000001535_01005
• CAZy Family: SLH
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1635	MGYG000001535_9|CGC8	179193.63	4.6576

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001535	5515101	Isolate	not provided	not provided

• Gene Location: Start: 412830; End: 417737 Strand: -

Full Sequence      

MKKTLTKLTSLILLGGLLVTSIGPFQTAHAAPGLQVTEGQVQGEYKLDLSQVGNVDWLHL
KRDAQGKMEVIKKASSSTVTFSVYGDTETEGKADKGGDANYLSYSWTDGMAGYEQGDRDT
GFGIFFPKASRDPGTYDNVGWNFDIAPQSQESTVVFGIGVWQADADIHIYSDDVRVETRK
IGAGGASQIYKYQIAIPANVSLKVEGRLTQVKARDGNMTFSGLALSSADVVDKIALQNEY
SKVKDMTQGLFTDVSWQAFVTARETAKTLLEKPDATQQEIDDALQALLDAQAALKKRETR
IKIDFMGSGSKEYTFGAKGDQQDRYQTFTVNESFEMEYVQVVVNRANEPVSDLLVKLYAT
DSQGLPTGTALAETSVAQNQVISGAITTVPLQYALTQNTRYALVLSQQALGSGEYRWKVM
NKSFESQNEYFGKSVSGVFKSESDLGTGMLRIVEKSDVDRSGLQSLVKDAEQYNRRLFNS
SSWSQVEIALTQARAQLNNMDVKQADLDLAYDQLELAISHLVLNIGLDEVAEQIGSIRNA
VVTGYTAQSVDELKKAVQEALALGAGAVEQDRIMAYSKVLNALESLRGEGQYQFEAHPQM
TAAFGFEGDKNASLAFLDGSYQIGGYRHYQHGPVAPKQMVTFGVTDTSNIKWYNAEGYLP
AFINEYAKNEMEYKIESFANKHTVDGKDYVINYSRMTVTNHSGETRLLPVVSNNLIPINE
AANQVYTIAPGETVIRDYAIEADKYEYFDEGKTVFTSLTREQVAGQGNFDDNYNAMKLYW
NNRLSAIVDLDLPNQELVHAFKAGYIYTLIIKDDTYLHVGENGYARLFSHDTIGILVQLI
ESGDFAYAEDYLNSIPLTGGINIETGEVDPDQYWDANWKLPWAYAVYLSKTGDASIFDKM
MTGDDGSQGTVFEKRVKIGARSIETDRMGDGGIMKETYAIDDKGYWTIDNYSALMGLAAY
EYITRELYRIKGDASYLAEADWAEAQHADLLTKFTDKLQKTITDNGLHYIPASVVESNDK
NRMRDSRDANWASMYLFGRWLWDGYLYGAEQPEDNINLTMMDDTYTYGIERRMNEQTTDS
PYNFGGYPHGFYSSAYNAGYGSSALRGEQYRDMGIKAYEFMIENSMSGPFSWWEGVAYPA
ASSPWTATNEWLGLQNTPGGGGSAQHMWGQAVNSKVLRDSLIAERIFDQNEKYEIIIGRG
IPKEWVENAALHNHVVVEVQNYPAFQGGRVGYKIERQANQLIVTLTRRLEQAKADTDNAS
FSIQLPSMVNNILETSVGVVDEGKGIVTVPINTDSVTITLADLPGLSDVELDYAALKIGF
TAGDSDSSVTQNVTLGKTGEHGSTITWASSDPGVISETGIVKRPSVTTQVTLTATLEKNG
VKMQKTFVLTAKAKPDGNPGNPGNGGGNNGGNSGGANSGTNNNSDGSHRNDGTNGNGTNS
GNTSNGNNSGAKGNTETTFSKFTDIANHWAREAIATAVESGIIKGYEDGTFRPNGAVTRS
EILVMLSRALGLKQEDMPLSFKDAAKIPVWARPYIAGAVKSGLANGYEDGTFRPGAKITR
MEFVALVARALNLQPETNATLPFADSNQIPSWGAGYAAALYQAGLIEGKENNRFAPNDPV
TRAEAVTLLLRLAHE

Enzyme Prediction     

No EC number prediction in MGYG000001535_01005.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
SLH	1462	1501	2.8e-16	0.9523809523809523

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
NF033190	inl_like_NEAT_1	1.00e-14	1452	1629	572	748	NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading.
NF033190	inl_like_NEAT_1	8.80e-13	1460	1571	641	752	NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading.
pfam00395	SLH	6.79e-12	1462	1501	1	41	S-layer homology domain.
pfam00395	SLH	2.10e-10	1521	1563	1	42	S-layer homology domain.
pfam00395	SLH	2.38e-10	1583	1625	1	42	S-layer homology domain.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ALN14952.1	6.64e-182	47	1300	57	1136
APZ09297.1	6.64e-182	47	1300	57	1136
QCV93927.1	1.21e-179	47	1300	1	1080
AOZ47007.1	1.32e-179	47	1300	57	1136
AZP36897.1	1.32e-179	47	1300	57	1136

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
4AQ1_A	1.04e-10	1460	1631	2	166	Structureof the SbsB S-layer protein of Geobacillus stearothermophilus PV72p2 in complex with nanobody KB6 [Geobacillus stearothermophilus]
4AQ1_C	1.04e-10	1460	1631	2	166	Structureof the SbsB S-layer protein of Geobacillus stearothermophilus PV72p2 in complex with nanobody KB6 [Geobacillus stearothermophilus]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
C6CRV0	7.15e-20	1457	1632	1278	1458	Endo-1,4-beta-xylanase A OS=Paenibacillus sp. (strain JDR-2) OX=324057 GN=xynA1 PE=1 SV=1
P38536	1.52e-18	1462	1632	1682	1854	Amylopullulanase OS=Thermoanaerobacterium thermosulfurigenes OX=33950 GN=amyB PE=3 SV=2
P38535	1.59e-16	1462	1632	908	1080	Exoglucanase XynX OS=Acetivibrio thermocellus OX=1515 GN=xynX PE=3 SV=1
P38537	2.48e-15	1469	1631	42	204	Surface-layer 125 kDa protein OS=Lysinibacillus sphaericus OX=1421 PE=3 SV=1
Q06848	1.23e-14	1454	1585	280	412	Cellulosome-anchoring protein OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=ancA PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000250	0.999022	0.000178	0.000203	0.000159	0.000137

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001535_01005.