CAZyme Information: MGYG000001507_00907

Basic Information

• Species: Paenibacillus ihuae
• Lineage: Bacteria; Firmicutes; Bacilli; Paenibacillales; Paenibacillaceae; Paenibacillus; Paenibacillus ihuae
• CAZyme ID: MGYG000001507_00907
• CAZy Family: GH3
• CAZyme Description: Xylan 1,4-beta-xylosidase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
940		102510.06	4.4269

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000001507	6631509	Isolate	not provided	not provided

• Gene Location: Start: 974860; End: 977682 Strand: +

Full Sequence      

METATYPFQQTDLPLNERVQDLLSRLTLEEKVSLMPQYQAEIERLGVGAYKHGTEGAHGI
SWLGKATSFPQPSGLACTWNPELMKQIGSAIGDEARAFYKKNPTVNGLTLWAPTVDMERD
PRWGRTEEAYGEDPELTGRLSTSLVQGIQGDHPVYLKAVATLKHFLGNNNEINRGVDSSS
IDPRNMREYYLEAFKPAFKEGGAQSMMTAYNSVNGVPVILHPAVMDVVKGEWEMDGFIVS
DAGDLFGIVKDHKYYESFAQSMAESIKNGIDSVTEETAETIKVIHEALAEGLLAEADLDR
ALFNTFRVRFRLGEFDPEEGNPYASIDDSVILCKEHSELSLEAAKQSIVLLKNENAALPL
NPQELSKVAVIGPLGDEAFRDWYSGTLAYGVTPLQGVTKKLAGKQVTFESGDDRIILTSA
ASGQAVGMTGEDGRLAVLHDVPERGELFRHTAWGWTAHTLEATSCGQYVTLNDANTLTAS
ADEIYGWYVKESLNLVSEEDGTVSLRTWNDQPIIVSEDGTLRASEPEGDAKAYAFRKNIV
VNGVEAAVEAAKAAEVAVVFVGNHPLLNGKEEIDRPDIVLPAEQENLVKAVYAANPNTVV
VIVGSYPITSTWIDKHIPAVLYTSHSGQELGNAVADVLFGGYSPSGKLNMTWYRSVDQLP
PLMDYDIIKGKRTYMYFDGEPLYPFGHGLSYAQVTYKQLTLAAEELQQNDTISLSVELEN
SGSVDSDEVVQLYVQSLSTRIRRPLKQLKGFEKIRLGAGESQTVVFSLPVGELVFWDVTR
EQYCVEDGEYNILVGRSSGDIQLSAKIRVHGDIVPARNLYVSVKAENYDDYEGVYLDECK
AGGASVHPVQDGAWIAFNNVQFADGAAAFEALVSSVGGGSIEVRTGSPSGKLAATLEVPA
GGGLQEWHTLSAVAGVDAGTTDVFLLFAGEVLLSRFQFTL

Enzyme Prediction     

EC	3.2.1.120	3.2.1.74

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH3	40	272	1.2e-63	0.9768518518518519
CBM6	824	939	5.9e-22	0.8623188405797102

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
PRK15098	PRK15098	2.40e-106	4	802	20	758	beta-glucosidase BglX.
PLN03080	PLN03080	2.30e-97	4	768	38	742	Probable beta-xylosidase; Provisional
COG1472	BglX	4.26e-75	38	410	51	395	Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
pfam01915	Glyco_hydro_3_C	2.85e-42	348	691	1	216	Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.
pfam00933	Glyco_hydro_3	3.08e-41	53	302	71	310	Glycosyl hydrolase family 3 N terminal domain.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QSF46317.1	0.0	1	940	1	940
AIQ45888.1	0.0	1	938	1	939
AIQ51517.1	0.0	1	939	1	938
AIQ28299.1	0.0	1	940	1	940
AIQ57079.1	0.0	1	940	1	940

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
7MS2_A	4.05e-83	19	827	5	686	ChainA, Thermostable beta-glucosidase B [Acetivibrio thermocellus AD2],7MS2_B Chain B, Thermostable beta-glucosidase B [Acetivibrio thermocellus AD2]
3AC0_A	2.13e-77	19	813	6	840	Crystalstructure of Beta-glucosidase from Kluyveromyces marxianus in complex with glucose [Kluyveromyces marxianus],3AC0_B Crystal structure of Beta-glucosidase from Kluyveromyces marxianus in complex with glucose [Kluyveromyces marxianus],3AC0_C Crystal structure of Beta-glucosidase from Kluyveromyces marxianus in complex with glucose [Kluyveromyces marxianus],3AC0_D Crystal structure of Beta-glucosidase from Kluyveromyces marxianus in complex with glucose [Kluyveromyces marxianus]
5Z87_A	8.25e-75	32	802	108	778	ChainA, EmGH1 [Aurantiacibacter marinus],5Z87_B Chain B, EmGH1 [Aurantiacibacter marinus]
3ABZ_A	1.62e-74	19	813	6	840	Crystalstructure of Se-Met labeled Beta-glucosidase from Kluyveromyces marxianus [Kluyveromyces marxianus],3ABZ_B Crystal structure of Se-Met labeled Beta-glucosidase from Kluyveromyces marxianus [Kluyveromyces marxianus],3ABZ_C Crystal structure of Se-Met labeled Beta-glucosidase from Kluyveromyces marxianus [Kluyveromyces marxianus],3ABZ_D Crystal structure of Se-Met labeled Beta-glucosidase from Kluyveromyces marxianus [Kluyveromyces marxianus]
6R5I_A	1.24e-71	37	802	62	726	ChainA, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5I_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_A Chain A, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1],6R5N_B Chain B, Periplasmic beta-glucosidase [Pseudomonas aeruginosa PAO1]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q94KD8	3.89e-94	3	805	39	760	Probable beta-D-xylosidase 2 OS=Arabidopsis thaliana OX=3702 GN=BXL2 PE=2 SV=1
D5EY15	3.79e-93	5	803	21	854	Xylan 1,4-beta-xylosidase OS=Prevotella ruminicola (strain ATCC 19189 / JCM 8958 / 23) OX=264731 GN=xyl3A PE=1 SV=1
T2KMH0	9.27e-87	11	798	29	710	Beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22130 PE=1 SV=1
Q9FGY1	1.92e-85	3	764	44	731	Beta-D-xylosidase 1 OS=Arabidopsis thaliana OX=3702 GN=BXL1 PE=1 SV=1
P27034	1.51e-82	19	814	2	815	Beta-glucosidase OS=Rhizobium radiobacter OX=358 GN=cbg-1 PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000070	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000001507_00907.