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CAZyme Information: MGYG000001501_01241

You are here: Home > Sequence: MGYG000001501_01241

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacillus_J andreraoultii
Lineage Bacteria; Firmicutes; Bacilli; Bacillales_B; Caldibacillaceae; Bacillus_J; Bacillus_J andreraoultii
CAZyme ID MGYG000001501_01241
CAZy Family GH39
CAZyme Description HTH-type transcriptional activator RhaS
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
777 MGYG000001501_14|CGC1 90468.1 6.1125
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000001501 4050118 Isolate not provided not provided
Gene Location Start: 141988;  End: 144321  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000001501_01241.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH39 341 715 4e-18 0.9280742459396751

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3664 XynB 3.51e-30 347 776 1 427
Beta-xylosidase [Carbohydrate transport and metabolism].
COG2207 AraC 5.48e-28 167 275 19 127
AraC-type DNA-binding domain and AraC-containing proteins [Transcription].
smart00342 HTH_ARAC 8.20e-26 184 267 1 84
helix_turn_helix, arabinose operon control protein.
pfam12833 HTH_18 5.34e-22 190 267 1 79
Helix-turn-helix domain.
COG4977 GlxA 7.74e-20 161 268 213 320
Transcriptional regulator GlxA family, contains an amidase domain and an AraC-type DNA-binding HTH domain [Transcription].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QYF80459.1 0.0 5 777 5 772
QHS24385.1 9.29e-144 27 774 4 756
QOF64550.1 5.57e-113 10 774 7 777
QOF56795.1 5.57e-113 10 774 7 777
QOF62367.1 3.00e-112 4 774 2 777

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6SWI_A 1.02e-09 170 267 7 105
TheC-terminal domain of AraT, a response regulator from Geobacillus stearothermophilus [Geobacillus stearothermophilus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q6GKK1 6.16e-61 26 774 21 740
Uncharacterized HTH-type transcriptional regulator SAR0107 OS=Staphylococcus aureus (strain MRSA252) OX=282458 GN=SAR0107 PE=4 SV=1
Q5HJR8 1.58e-60 26 774 21 740
Uncharacterized HTH-type transcriptional regulator SACOL0084 OS=Staphylococcus aureus (strain COL) OX=93062 GN=SACOL0084 PE=4 SV=2
Q6GD21 7.62e-60 26 774 21 740
Uncharacterized HTH-type transcriptional regulator SAS0078 OS=Staphylococcus aureus (strain MSSA476) OX=282459 GN=SAS0078 PE=4 SV=1
Q8NYT6 7.62e-60 26 774 21 740
Uncharacterized HTH-type transcriptional regulator MW0077 OS=Staphylococcus aureus (strain MW2) OX=196620 GN=MW0077 PE=4 SV=1
Q7A882 1.43e-59 26 774 21 740
Uncharacterized HTH-type transcriptional regulator SA0097 OS=Staphylococcus aureus (strain N315) OX=158879 GN=SA0097 PE=4 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000071 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000001501_01241.